Evidence map›Paper›PMID 27871796›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2017

Diversity of bat astroviruses in Lao PDR and Cambodia.

Audrey Lacroix, Veasna Duong, Vibol Hul, Sorn San, Holl Davun, Keo Omaliss, Sokha Chea, Alexandre Hassanin, Watthana Theppangna, Soubanh Silithammavong and 12 more

Open access · greenAbstract read
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 3 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 3 syntheses or guidelines pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Bat Astrovirus in Mozambique.Virology journal · 2018
    Article
  10. Distribution of bat-borne viruses and environment patterns.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2018
    Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 8 institutions in 5 countries.

Audrey LacroixInstitut Pasteur du Cambodge, Virology Unit, Phnom Penh, Cambodia.
Veasna DuongInstitut Pasteur du Cambodge, Virology Unit, Phnom Penh, Cambodia.
Vibol HulInstitut Pasteur du Cambodge, Virology Unit, Phnom Penh, Cambodia.
Sorn SanNational Veterinary Research Institute, Department of Animal Health and Production, Ministry of Agriculture Forestry and Fisheries, Cambodia.
Holl DavunNational Veterinary Research Institute, Department of Animal Health and Production, Ministry of Agriculture Forestry and Fisheries, Cambodia.
Keo OmalissForest Administration, Ministry of Agriculture Forestry and Fisheries, Cambodia.
Sokha CheaWildlife Conservation Society, Cambodia.
Alexandre HassaninInstitut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205 MNHN CNRS UPMC, EPHE, Muséum national d'Histoire naturelle, Paris, France; Muséum national d'Histoire naturelle, Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205 MNHN CNRS UPMC, France.
Watthana TheppangnaNational Animal Health Laboratory, Ministry of Agriculture Forestry and Fisheries, Laos.
Soubanh SilithammavongWildlife Conservation Society, Laos; Metabiota Inc., Vientiane, Laos.
Kongsy KhammavongWildlife Conservation Society, Laos.
Sinpakone SinghalathWildlife Conservation Society, Laos.
Aneta AfeltInstitute of Physical Geography, Faculty of Geography and Regional Studies, University of Warsaw, Warsaw, Poland.
Zoe GreatorexWildlife Conservation Society, Laos.
Amanda E FineWildlife Conservation Society, Wildlife Health Program, Bronx, N.Y., USA.
Tracey GoldsteinOne Health Institute, School of Veterinary Medicine, University of California, Davis, USA.
Sarah OlsonWildlife Conservation Society, Wildlife Health Program, Bronx, N.Y., USA.
Damien O JolyWildlife Conservation Society, Wildlife Health Program, Bronx, N.Y., USA; Metabiota Inc., Nanaimo, British Columbia, Canada.
Lucy KeattsWildlife Conservation Society, Cambodia.
Philippe DussartInstitut Pasteur du Cambodge, Virology Unit, Phnom Penh, Cambodia.
Roger FrutosCirad, UMR 17, Cirad-Ird, TA-A17/G, Montpellier, France; Université de Montpellier, IES, UMR 5214, CNRS-UM, Montpellier, France. Electronic address: roger.frutos@ies.univ-montp2.fr.
Philippe BuchyInstitut Pasteur du Cambodge, Virology Unit, Phnom Penh, Cambodia; GSK Vaccines R&D, 150 Beach road, # 22-00, 189720, Singapore. Electronic address: buchyphilippe@hotmail.com.
Institut Pasteur du Cambodge · KHWildlife Conservation Society Laos · LAMinistry of Agriculture Forestry and Fisheries · KHWildlife Conservation Society · USÉcole Pratique des Hautes Études · FRMinistry of Agriculture and Forestry · LAUniversity of California, Davis · USUniversity of Warsaw · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Astroviruses are known to infect humans and a wide range of animal species, and can cause gastroenteritis in their hosts. Recent studies have reported astroviruses in bats in Europe and in several locations in China. We sampled 1876 bats from 17 genera at 45 sites from 14 and 13 provinces in Cambodia and Lao PDR respectively, and tested them for astroviruses. Our study revealed a high diversity of astroviruses among various Yangochiroptera and Yinpterochiroptera bats. Evidence for varying degrees of host restriction for astroviruses in bats was found. Furthermore, additional Pteropodid hosts were detected. The astroviruses formed distinct phylogenetic clusters within the genus Mamastrovirus, most closely related to other known bat astroviruses. The astrovirus sequences were found to be highly saturated indicating that phylogenetic relationships should be interpreted carefully. An astrovirus clustering in a group with other viruses from diverse hosts, including from ungulates and porcupines, was found in a Rousettus bat. These findings suggest that diverse astroviruses can be found in many species of mammals, including bats.

Indexed as

AnimalsAstroviridaeAstroviridae InfectionsCambodiaChiropteraFecesGenetic VariationLaosLungMouthPhylogenyRectumAstrovirusesBatsCambodiaGenetic diversityLao PDR

Identifiers

PMID27871796
PMCPMC7106329
OpenAlexW2556641214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.