Evidence map›Paper›PMID 27871334›Full record

ArticleMicrobial cell factories2016

Exploiting members of the BAHD acyltransferase family to synthesize multiple hydroxycinnamate and benzoate conjugates in yeast.

Aymerick Eudes, Maxence Mouille, David S Robinson, Veronica T Benites, George Wang, Lucien Roux, Yi-Lin Tsai, Edward E K Baidoo, Tsan-Yu Chiu, Joshua L Heazlewood and 5 more

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 5 countries.

Aymerick EudesJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Maxence MouilleJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
David S RobinsonJoint Genome Institute, Walnut Creek, CA, 94598, USA.
Veronica T BenitesJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
George WangJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Lucien RouxJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Yi-Lin TsaiJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Edward E K BaidooJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Tsan-Yu ChiuJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Joshua L HeazlewoodJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Henrik V SchellerJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Aindrila MukhopadhyayJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Jay D KeaslingJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA.
Samuel DeutschJoint Genome Institute, Walnut Creek, CA, 94598, USA.
Dominique LoquéJoint BioEnergy Institute, EmeryStation East, 5885 Hollis St., 4th Floor, Emeryville, CA, 94608, USA. dloque@lbl.gov.ORCID http://orcid.org/0000-0002-2060-6611
Lawrence Berkeley National Laboratory · USJoint Genome Institute · USUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBAHD acyltransferases, named after the first four biochemically characterized enzymes of the group, are plant-specific enzymes that catalyze the transfer of coenzyme A-activated donors onto various acceptor molecules. They are responsible for the synthesis in plants of a myriad of secondary metabolites, some of which are beneficial for humans either as therapeutics or as specialty chemicals such as flavors and fragrances. The production of pharmaceutical, nutraceutical and commodity chemicals using engineered microbes is an alternative, green route to energy-intensive chemical syntheses that consume petroleum-based precursors. However, identification of appropriate enzymes and validation of their functional expression in heterologous hosts is a prerequisite for the design and implementation of metabolic pathways in microbes for the synthesis of such target chemicals.

resultsFor the synthesis of valuable metabolites in the yeast Saccharomyces cerevisiae, we selected BAHD acyltransferases based on their preferred donor and acceptor substrates. In particular, BAHDs that use hydroxycinnamoyl-CoAs and/or benzoyl-CoA as donors were targeted because a large number of molecules beneficial to humans belong to this family of hydroxycinnamate and benzoate conjugates. The selected BAHD coding sequences were synthesized and cloned individually on a vector containing the Arabidopsis gene At4CL5, which encodes a promiscuous 4-coumarate:CoA ligase active on hydroxycinnamates and benzoates. The various S. cerevisiae strains obtained for co-expression of At4CL5 with the different BAHDs effectively produced a wide array of valuable hydroxycinnamate and benzoate conjugates upon addition of adequate combinations of donors and acceptor molecules. In particular, we report here for the first time the production in yeast of rosmarinic acid and its derivatives, quinate hydroxycinnamate esters such as chlorogenic acid, and glycerol hydroxycinnamate esters. Similarly, we achieved for the first time the microbial production of polyamine hydroxycinnamate amides; monolignol, malate and fatty alcohol hydroxycinnamate esters; tropane alkaloids; and benzoate/caffeate alcohol esters. In some instances, the additional expression of Flavobacterium johnsoniae tyrosine ammonia-lyase (FjTAL) allowed the synthesis of p-coumarate conjugates and eliminated the need to supplement the culture media with 4-hydroxycinnamate.

conclusionWe demonstrate in this study the effectiveness of expressing members of the plant BAHD acyltransferase family in yeast for the synthesis of numerous valuable hydroxycinnamate and benzoate conjugates.

Indexed as

AcyltransferasesBenzoatesCoumaric AcidsHumansYeastsAcyltransferasesBenzoatesCoumaric AcidsAntioxidantBAHDCAPEFlavors and fragrancesTherapeuticsYeast

Identifiers

PMID27871334
PMCPMC5117604
OpenAlexW2555421189

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.