Evidence map›Paper›PMID 27871240›Full record

ArticleBMC genomics2016

ABO antigen and secretor statuses are not associated with gut microbiota composition in 1,500 twins.

Emily R Davenport, Julia K Goodrich, Jordana T Bell, Tim D Spector, Ruth E Ley, Andrew G Clark

Open access · goldAbstract readTwin Study
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Article
  6. Colon mucus in colorectal neoplasia and beyond.World journal of gastroenterology · 2022
    Review
  7. Microbiome-associated human genetic variants impact phenome-wide disease risk.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
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  17. Article
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  19. Article
  20. Fucosidases from the human gut symbiont Ruminococcus gnavus.Cellular and molecular life sciences : CMLS · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Emily R DavenportDepartment of Molecular Biology & Genetics, Cornell University, Ithaca, NY, USA. ed379@cornell.edu.
Julia K GoodrichDepartment of Molecular Biology & Genetics, Cornell University, Ithaca, NY, USA.
Jordana T BellDepartment of Twin Research and Genetic Epidemiology, King's College London, London, UK.
Tim D SpectorDepartment of Twin Research and Genetic Epidemiology, King's College London, London, UK.
Ruth E LeyDepartment of Molecular Biology & Genetics, Cornell University, Ithaca, NY, USA.
Andrew G ClarkDepartment of Molecular Biology & Genetics, Cornell University, Ithaca, NY, USA.
Cornell University · USKing's College London · GBMax Planck Institute for Developmental Biology · DE

Funding

Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Shuibing Chen · 2015 to 2026
$27.7M
Genetic Transmission of Components of the Human Gut MicrobiomeR01DK093595 · NIDDK · CORNELL UNIVERSITY · PI CLARK, ANDREW G, LEY, RUTH EMILY · 2011 to 2020
$3.5M
Development of immunization strategies to reshape pathogenic microbiomesDP2OD007444 · OD · CORNELL UNIVERSITY · PI LEY, RUTH EMILY · 2010 to 2010
$2.3M
Modeling Human Gut Microbiome Community Structure in Healthy and Diseased StatesF32DK109595 · NIDDK · CORNELL UNIVERSITY · PI DAVENPORT, EMILY · 2016 to 2018
$173k
NIDDK NIH HHS F32 DK109595NIDDK NIH HHS R01 DK093595NIH HHS DP2 OD007444Wellcome Trust
6 · The paper itself

Abstract

backgroundHost genetics is one of several factors known to shape human gut microbiome composition, however, the physiological processes underlying the heritability are largely unknown. Inter-individual differences in host factors secreted into the gut lumen may lead to variation in microbiome composition. One such factor is the ABO antigen. This molecule is not only expressed on the surface of red blood cells, but is also secreted from mucosal surfaces in individuals containing an intact FUT2 gene (secretors). Previous studies report differences in microbiome composition across ABO and secretor genotypes. However, due to methodological limitations, the specific bacterial taxa involved remain unknown.

resultsHere, we sought to determine the relationship of the microbiota to ABO blood group and secretor status in a large panel of 1503 individuals from a cohort of twins from the United Kingdom. Contrary to previous reports, robust associations between either ABO or secretor phenotypes and gut microbiome composition were not detected. Overall community structure, diversity, and the relative abundances of individual taxa were not significantly associated with ABO or secretor status. Additionally, joint-modeling approaches were unsuccessful in identifying combinations of taxa that were predictive of ABO or secretor status.

conclusionsDespite previous reports, the taxonomic composition of the microbiota does not appear to be strongly associated with ABO or secretor status in 1503 individuals from the United Kingdom. These results highlight the importance of replicating microbiome-associated traits in large, well-powered cohorts to ensure results are robust.

Indexed as

BiodiversityGastrointestinal MicrobiomeTwinsABO Blood-Group SystemAdultAgedFemaleGenotypeHumansMaleMiddle AgedPhenotypeUnited KingdomABO Blood-Group SystemABOBlood group antigensFUT2HeritabilityMicrobiomeSecretor status

Identifiers

PMID27871240
PMCPMC5117602
OpenAlexW2552874420

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.