Evidence map›Paper›PMID 27870903›Full record

ArticlePloS one2016

rDNA Loci Evolution in the Genus Glechoma (Lamiaceae).

Tae-Soo Jang, Jamie McCann, John S Parker, Koji Takayama, Suk-Pyo Hong, Gerald M Schneeweiss, Hanna Weiss-Schneeweiss

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Plants (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Chromosome-level assembly of theFrontiers in plant science · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. The Chromosome Number and rDNA Loci Evolution inInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Molecular and Cytogenetic Analysis of rDNA Evolution in Crepis Sensu Lato.International journal of molecular sciences · 2022
    Article
  10. Cytological Study ofPlants (Basel, Switzerland) · 2021
    Article
  11. Variation in Ribosomal DNA in the GenusPlants (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Tae-Soo JangDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, Vienna, Austria.
Jamie McCannDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, Vienna, Austria.
John S ParkerCambridge University Botanic Garden, Cambridge, United Kingdom.
Koji TakayamaMuseum of Natural and Environmental History, Shizuoka, Oya 5762, Suruga-ku, Shizuoka-shi, Sizuoka, Japan.
Suk-Pyo HongLaboratory of Plant Systematics, Department of Biology, Kyung Hee University, 1 Hoegi-Dong, Dongdaemun-Gu, Seoul, Korea.
Gerald M SchneeweissDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, Vienna, Austria.
Hanna Weiss-SchneeweissDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, Vienna, Austria.ORCID http://orcid.org/0000-0002-9530-6808
University of Vienna · ATKyung Hee University · KRMuseum of Natural and Environmental History, Shizuoka · JPUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glechoma L. (Lamiaceae) is distributed in eastern Asia and Europe. Understanding chromosome evolution in Glechoma has been strongly hampered by its small chromosomes, constant karyotype and polyploidy. Here phylogenetic patterns and chromosomal variation in Glechoma species are considered, using genome sizes, chromosome mapping of 5S and 35S rDNAs by fluorescence in situ hybridisation (FISH), and phylogenetic analyses of internal transcribed spacers (nrITS) of 35S rDNA and 5S rDNA NTS sequences. Species and populations of Glechoma are tetraploid (2n = 36) with base chromosome number of x = 9. Four chromosomes carry pericentric 5S rDNA sites in their short arms in all the species. Two to four of these chromosomes also carry 35S rDNA in subterminal regions of the same arms. Two to four other chromosomes have 35S rDNA sites, all located subterminally within short arms; one individual possessed additional weak pericentric 35S rDNA signals on three other chromosomes. Five types of rDNA locus distribution have been defined on the basis of 35S rDNA variation, but none is species-specific, and most species have more than one type. Glechoma hederacea has four types. Genome size in Glechoma ranges from 0.80 to 0.94 pg (1C), with low levels of intrapopulational variation in all species. Phylogenetic analyses of ITS and NTS sequences distinguish three main clades coinciding with geographical distribution: European (G. hederacea-G. hirsuta), Chinese and Korean (G. longituba), and Japanese (G. grandis). The paper presents the first comparative cytogenetic analyses of Glechoma species including karyotype structure, rDNA location and number, and genome size interpreted in a phylogenetic context. The observed variation suggests that the genus is still in genomic flux. Genome size, but not rDNA loci number and distribution, provides a character for species delimitation which allows better inferences of interspecific relationships to be made, in the absence of well-defined morphological differentiation.

Indexed as

Evolution, MolecularGenetic LociPolyploidyDNA, PlantDNA, RibosomalLamiaceaeDNA, PlantDNA, Ribosomal

Identifiers

PMID27870903
PMCPMC5117774
OpenAlexW2552144962

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.