Evidence map›Paper›PMID 27867194›Full record

ReviewNature reviews. Genetics2017

Regulatory activities of transposable elements: from conflicts to benefits.

Edward B Chuong, Nels C Elde, Cédric Feschotte

Open access · greenAbstract readReview
In one paragraph

Review in Nature reviews. Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 826 papers.

0numbers the graph read from it
0cells of the map it votes in
826citing papers in PubMed
251.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

826 citing papers in PubMed, 1,440 citations in OpenAlex.

  1. Progresses of transposon research inSynthetic and systems biotechnology · 2026
    Review
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  10. Machine learning reveals sequence and genomic context features underlyingbioRxiv : the preprint server for biology · 2026
    Article
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  18. Review
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766 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Edward B ChuongDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah 84103, USA.
Nels C EldeDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah 84103, USA.
Cédric FeschotteDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah 84103, USA.
University of Utah · US

Funding

POPULATION GENETICS OF MOBILE ELEMENTSR01GM059290 · NIGMS · UNIVERSITY OF UTAH · PI BATZER, MARK A, FESCHOTTE, CEDRIC · 1999 to 2018
$8.5M
Mechanisms of mimicry underlying the evolution of a model poxvirusR01GM114514 · NIGMS · UNIVERSITY OF UTAH · PI ELDE, NELS C. · 2015 to 2019
$1.6M
Human DNA transposons: evolutionary history and genomic impactR01GM077582 · NIGMS · UNIVERSITY OF UTAH · PI FESCHOTTE, CEDRIC · 2007 to 2015
$1.4M
Endogenous Retroviruses Co-Opted for Immune DefensesR01GM112972 · NIGMS · UNIVERSITY OF UTAH · PI FESCHOTTE, CEDRIC · 2015 to 2017
$804k
NIGMS NIH HHS R01 GM059290NIGMS NIH HHS R01 GM077582NIGMS NIH HHS R01 GM112972NIGMS NIH HHS R01 GM114514
6 · The paper itself

Abstract

Transposable elements (TEs) are a prolific source of tightly regulated, biochemically active non-coding elements, such as transcription factor-binding sites and non-coding RNAs. Many recent studies reinvigorate the idea that these elements are pervasively co-opted for the regulation of host genes. We argue that the inherent genetic properties of TEs and the conflicting relationships with their hosts facilitate their recruitment for regulatory functions in diverse genomes. We review recent findings supporting the long-standing hypothesis that the waves of TE invasions endured by organisms for eons have catalysed the evolution of gene-regulatory networks. We also discuss the challenges of dissecting and interpreting the phenotypic effect of regulatory activities encoded by TEs in health and disease.

Indexed as

Evolution, MolecularGene Regulatory NetworksAnimalsDNA Transposable ElementsHumansDNA Transposable Elements

Identifiers

PMID27867194
PMCPMC5498291
OpenAlexW2556763090

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.