Evidence map›Paper›PMID 27866900›Full record

ArticleCell host & microbe2016

A Viral Deamidase Targets the Helicase Domain of RIG-I to Block RNA-Induced Activation.

Jun Zhao, Yi Zeng, Simin Xu, Jie Chen, Guobo Shen, Caiqun Yu, David Knipe, Weiming Yuan, Jian Peng, Wenqing Xu and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 122 citations in OpenAlex.

  1. Article
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  10. Article
  11. Article
  12. Article
  13. Review
  14. Evasion of the Antiviral Innate Immunity by PRV.International journal of molecular sciences · 2024
    Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Jun ZhaoDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA.
Yi ZengDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA.
Simin XuDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA.
Jie ChenDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA; Division of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan 410008, China.
Guobo ShenDepartment of Biological Structure, University of Washington School of Medicine, Seattle, WA 98195, USA.
Caiqun YuDepartment of Chemistry, Dornsife College of Arts, Letters, and Sciences, University of Southern California, LJS 369, 840 Downey Way, Los Angeles, CA 90089, USA.
David KnipeDepartment of Microbiology and Molecular Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA.
Weiming YuanDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA.
Jian PengDivision of General Surgery, Xiangya Hospital, Central South University, Changsha, Hunan 410008, China.
Wenqing XuDepartment of Biological Structure, University of Washington School of Medicine, Seattle, WA 98195, USA.
Chao ZhangDepartment of Chemistry, Dornsife College of Arts, Letters, and Sciences, University of Southern California, LJS 369, 840 Downey Way, Los Angeles, CA 90089, USA.
Zanxian XiaState Key Laboratory of Medical Genetics and School of Life Sciences, Central South University, Changsha, Hunan 410008, China.
Pinghui FengDepartment of Molecular Microbiology and Immunology, Norris Comprehensive Cancer Center, University of Southern California, 1441 Eastlake Street, Los Angeles, CA 90033, USA. Electronic address: pinghui.feng@usc.edu.
University of Southern California · USCentral South University · CNUniversity of Washington · USHarvard University · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MYLES G COCKBURN · 1985 to 2026
$181.4M
USC RESEARCH CENTER FOR LIVER DISEASES: PILOT PROGRAMSP30DK048522 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OOKHTENS, MURAD · 1995 to 2020
$21.8M
Roles of the K3 and K5 in KSHV Persistence and PathogenesisP01CA180779 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2013 to 2017
$7.3M
Nuclear Sensing of Herpesviral DNAR01AI106934 · NIAID · HARVARD MEDICAL SCHOOL · PI KNIPE, DAVID M. · 2014 to 2021
$3.8M
Targeting an immune kinase to purge KSHV latent infectionR01DE026003 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, CASEY, ZHANG, CHAO · 2016 to 2020
$3.4M
Proviral Roles of an Innate Immune PathwayR01DE021445 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI FENG, PINGHUI · 2011 to 2017
$2.5M
Herpes simplex virus-1 evasion of CD1d antigen presentation pathwayR01AI091987 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI YUAN, WEIMING · 2012 to 2016
$2.0M
NCI NIH HHS P01 CA180779NCI NIH HHS P30 CA014089NIAID NIH HHS R01 AI091987NIAID NIH HHS R01 AI106934NIDCR NIH HHS R01 DE021445NIDCR NIH HHS R01 DE026003NIDDK NIH HHS P30 DK048522
6 · The paper itself

Abstract

RIG-I detects double-stranded RNA (dsRNA) to trigger antiviral cytokine production. Protein deamidation is emerging as a post-translational modification that chiefly regulates protein function. We report here that UL37 of herpes simplex virus 1 (HSV-1) is a protein deamidase that targets RIG-I to block RNA-induced activation. Mass spectrometry analysis identified two asparagine residues in the helicase 2i domain of RIG-I that were deamidated upon UL37 expression or HSV-1 infection. Deamidation rendered RIG-I unable to sense viral dsRNA, thus blocking its ability to trigger antiviral immune responses and restrict viral replication. Purified full-length UL37 and its carboxyl-terminal fragment were sufficient to deamidate RIG-I in vitro. Uncoupling RIG-I deamidation from HSV-1 infection, by engineering deamidation-resistant RIG-I or introducing deamidase-deficient UL37 into the HSV-1 genome, restored RIG-I activation and antiviral immune signaling. Our work identifies a viral deamidase and extends the paradigm of deamidation-mediated suppression of innate immunity by microbial pathogens.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateAntiviral AgentsAsparagineCell LineCytokinesDEAD Box Protein 58DNA HelicasesDNA, RecombinantEscherichia coliHEK293 CellsHerpes SimplexHerpesvirus 1, HumanHumansImmune EvasionImmunity, InnateAdenosine TriphosphatasesAdenosine TriphosphateAntiviral AgentsAsparagineCytokinesDEAD Box Protein 58DNA HelicasesDNA, RecombinantRNA, Double-StrandedRNA, ViralUL37 protein, Human herpesvirus 1Viral ProteinsViral Structural ProteinsATPase/helicasedeamidationherpesvirusimmune evasionRIG-IRNA-sensingUL37

Identifiers

PMID27866900
PMCPMC5159239
OpenAlexW2549958644

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.