Evidence map›Paper›PMID 27866838›Full record

ArticleCell metabolism2016

Glutaminolysis and Fumarate Accumulation Integrate Immunometabolic and Epigenetic Programs in Trained Immunity.

Rob J W Arts, Boris Novakovic, Rob Ter Horst, Agostinho Carvalho, Siroon Bekkering, Ekta Lachmandas, Fernando Rodrigues, Ricardo Silvestre, Shih-Chin Cheng, Shuang-Yin Wang and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell metabolism, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 553 papers.

0numbers the graph read from it
0cells of the map it votes in
553citing papers in PubMed
24.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

553 citing papers in PubMed, 816 citations in OpenAlex.

  1. Review
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  12. Article
  13. Article
  14. Innate immunity: current understandings and future perspectives.Signal transduction and targeted therapy · 2026
    Review
  15. Review
  16. Article
  17. PKM2: A gatekeeper in macrophage metabolic reprogramming.Journal of pharmaceutical analysis · 2026
    Review
  18. Review
  19. Article
  20. Review

493 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 8 institutions in 5 countries.

Rob J W ArtsDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands. Electronic address: rob.jw.arts@radboudumc.nl.
Boris NovakovicDepartment of Molecular Biology, Faculty of Science, Radboud University, 6525 HP Nijmegen, the Netherlands.
Rob Ter HorstDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Agostinho CarvalhoLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, 4710-057 Braga, Portugal; ICVS/3B's - PT Government Associate Laboratory, 4806-909 Braga/Guimarães, Portugal.
Siroon BekkeringDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Ekta LachmandasDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Fernando RodriguesLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, 4710-057 Braga, Portugal; ICVS/3B's - PT Government Associate Laboratory, 4806-909 Braga/Guimarães, Portugal.
Ricardo SilvestreLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, 4710-057 Braga, Portugal; ICVS/3B's - PT Government Associate Laboratory, 4806-909 Braga/Guimarães, Portugal.
Shih-Chin ChengDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands; Institute of Molecular Medicine, National Tsing Hua University, 300 Hsinchu City, Taiwan.
Shuang-Yin WangDepartment of Molecular Biology, Faculty of Science, Radboud University, 6525 HP Nijmegen, the Netherlands.
Ehsan HabibiDepartment of Molecular Biology, Faculty of Science, Radboud University, 6525 HP Nijmegen, the Netherlands.
Luís G GonçalvesInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, 2780-157 Oeiras, Portugal.
Inês MesquitaLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, 4710-057 Braga, Portugal; ICVS/3B's - PT Government Associate Laboratory, 4806-909 Braga/Guimarães, Portugal.
Cristina CunhaLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, 4710-057 Braga, Portugal; ICVS/3B's - PT Government Associate Laboratory, 4806-909 Braga/Guimarães, Portugal.
Arjan van LaarhovenDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Frank L van de VeerdonkDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
David L WilliamsDepartment of Surgery, Quillen College of Medicine and Center for Inflammation, Infectious Disease and Immunity, East Tennessee State University, Johnson City, TN 37604, USA.
Jos W M van der MeerDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Colin LogieDepartment of Molecular Biology, Faculty of Science, Radboud University, 6525 HP Nijmegen, the Netherlands.
Luke A O'NeillTrinity Biomedical Sciences Institute, Trinity College, Dublin 2, Ireland.
Charles A DinarelloDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands; Department of Medicine, University of Colorado Denver, Aurora, CO 80045, USA.
Niels P RiksenDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Reinout van CrevelDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Clary ClishBroad Institute of Harvard University and Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Richard A NotebaartDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Leo A B JoostenDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Hendrik G StunnenbergDepartment of Molecular Biology, Faculty of Science, Radboud University, 6525 HP Nijmegen, the Netherlands.
Ramnik J XavierBroad Institute of Harvard University and Massachusetts Institute of Technology, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology and Gastrointestinal Unit and Center for the Study of Inflammatory Bowel Disease, Massachusetts General Hospital, Boston, MA 02114, USA.
Mihai G NeteaDepartment of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, the Netherlands.
Radboud University Nijmegen · NLRadboud University Medical Center · NLUniversity of Minho · PTHarvard University · USEast Tennessee State University · USTrinity College Dublin · IEUniversidade Nova de Lisboa · PTUniversity Medical Center · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
Training Innate Immunity: A new approach to the treatment of SepsisR01GM119197 · NIGMS · EAST TENNESSEE STATE UNIVERSITY · PI SHERWOOD, EDWARD R, WILLIAMS, DAVID L. · 2016 to 2024
$4.6M
ATG16L1 T300A: genetics to biologyR01DK097485 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI XAVIER, RAMNIK J · 2013 to 2021
$4.1M
Innate Immunity and Cardiovascular Function in SepsisR01GM083016 · NIGMS · EAST TENNESSEE STATE UNIVERSITY · PI LI, CHUANFU, WILLIAMS, DAVID L. · 2009 to 2021
$3.8M
AMELIORATION OF SEPSIS BY MACROPHAGE ACTIVATIONR01GM053522 · NIGMS · EAST TENNESSEE STATE UNIVERSITY · PI WILLIAMS, DAVID L. · 1996 to 2015
$3.4M
European Research Council 310372NIDDK NIH HHS P30 DK043351NIDDK NIH HHS R01 DK097485NIGMS NIH HHS R01 GM053522NIGMS NIH HHS R01 GM083016NIGMS NIH HHS R01 GM119197
6 · The paper itself

Abstract

Induction of trained immunity (innate immune memory) is mediated by activation of immune and metabolic pathways that result in epigenetic rewiring of cellular functional programs. Through network-level integration of transcriptomics and metabolomics data, we identify glycolysis, glutaminolysis, and the cholesterol synthesis pathway as indispensable for the induction of trained immunity by β-glucan in monocytes. Accumulation of fumarate, due to glutamine replenishment of the TCA cycle, integrates immune and metabolic circuits to induce monocyte epigenetic reprogramming by inhibiting KDM5 histone demethylases. Furthermore, fumarate itself induced an epigenetic program similar to β-glucan-induced trained immunity. In line with this, inhibition of glutaminolysis and cholesterol synthesis in mice reduced the induction of trained immunity by β-glucan. Identification of the metabolic pathways leading to induction of trained immunity contributes to our understanding of innate immune memory and opens new therapeutic avenues.

Indexed as

Epigenesis, GeneticCholesterolFumaratesGlucoseGlutamineGlycolysisHumansHypoxia-Inducible Factor 1, alpha SubunitImmune ToleranceImmunity, InnateMacrophagesModels, BiologicalPentose Phosphate PathwayProteolysisCholesterolFumaratesGlucoseGlutamineHypoxia-Inducible Factor 1, alpha Subunitcholesterol metabolismepigeneticsglutamine metabolismglycolysistrained immunity

Identifiers

PMID27866838
PMCPMC5742541
OpenAlexW2557169014

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.