Evidence map›Paper›PMID 27866227›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

Genome-wide association mapping of resistance to eyespot disease (Pseudocercosporella herpotrichoides) in European winter wheat (Triticum aestivum L.) and fine-mapping of Pch1.

Christine D Zanke, Bernd Rodemann, Jie Ling, Quddoos H Muqaddasi, Jörg Plieske, Andreas Polley, Sonja Kollers, Erhard Ebmeyer, Viktor Korzun, Odile Argillier and 4 more

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Christine D ZankeLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Bernd RodemannJulius Kühn Institute (JKI), 38104, Brunswick, Germany.
Jie LingLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Quddoos H MuqaddasiLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Jörg PlieskeTraitGenetics GmbH, 06466, Gatersleben, Germany.
Andreas PolleyTraitGenetics GmbH, 06466, Gatersleben, Germany.
Sonja KollersKWS LOCHOW GmbH, 29303, Bergen, Germany.
Erhard EbmeyerKWS LOCHOW GmbH, 29303, Bergen, Germany.
Viktor KorzunKWS LOCHOW GmbH, 29303, Bergen, Germany.
Odile ArgillierSyngenta France S.A.S., 78910, Orgerus, France.
Gunther StieweSyngenta Seeds GmbH, 32107, Bad Salzuflen, Germany.
Thomas ZschäckelSyngenta Seeds GmbH, 32107, Bad Salzuflen, Germany.
Martin W GanalTraitGenetics GmbH, 06466, Gatersleben, Germany.
Marion S RöderLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany. roder@ipk-gatersleben.de.
Leibniz Institute of Plant Genetics and Crop Plant Research · DEJulius Kühn-Institut · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageGenotypes with recombination events in the Triticum ventricosum introgression on chromosome 7D allowed to fine-map resistance gene Pch1, the main source of eyespot resistance in European winter wheat cultivars. Eyespot (also called Strawbreaker) is a common and serious fungal disease of winter wheat caused by the necrotrophic fungi Oculimacula yallundae and Oculimacula acuformis (former name Pseudocercosporella herpotrichoides). A genome-wide association study (GWAS) for eyespot was performed with 732 microsatellite markers (SSR) and 7761 mapped SNP markers derived from the 90 K iSELECT wheat array using a panel of 168 European winter wheat varieties as well as three spring wheat varieties and phenotypic evaluation of eyespot in field tests in three environments. Best linear unbiased estimations (BLUEs) were calculated across all trials and ranged from 1.20 (most resistant) to 5.73 (most susceptible) with an average value of 4.24 and a heritability of H

Indexed as

Genes, PlantAscomycotaChromosome MappingDisease ResistanceGenetic Association StudiesGenetic MarkersGenotypeMicrosatellite RepeatsPhenotypePlant DiseasesPolymorphism, Single NucleotideTriticumGenetic Markers

Identifiers

PMID27866227
OpenAlexW2555232070

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.