Evidence map›Paper›PMID 27861972›Full record

ReviewPhotochemistry and photobiology2017

Cryptochromes Orchestrate Transcription Regulation of Diverse Blue Light Responses in Plants.

Zhaohe Yang, Bobin Liu, Jun Su, Jiakai Liao, Chentao Lin, Yoshito Oka

Open access · bronzeAbstract readReview
In one paragraph

Review in Photochemistry and photobiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 109 citations in OpenAlex.

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  9. Erwin Bünning and Wolfgang Engelmann: establishing the involvement of the circadian clock in photoperiodism.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zhaohe YangBasic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, Fuzhou, China.
Bobin LiuBasic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, Fuzhou, China.
Jun SuBasic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, Fuzhou, China.
Jiakai LiaoBasic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, Fuzhou, China.
Chentao LinDepartment of Molecular, Cell & Developmental Biology, University of California, Los Angeles, CA.
Yoshito OkaBasic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, Fuzhou, China.
Fujian Agriculture and Forestry University · CNUniversity of California, Los Angeles · US

Funding

The signaling mechanisms of Arabidopsis CRY2R01GM056265 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIN, CHENTAO · 2001 to 2021
$9.5M
NIGMS NIH HHS R01 GM056265
6 · The paper itself

Abstract

Blue light affects many aspects of plant growth and development throughout the plant lifecycle. Plant cryptochromes (CRYs) are UV-A/blue light photoreceptors that play pivotal roles in regulating blue light-mediated physiological responses via the regulated expression of more than one thousand genes. Photoactivated CRYs regulate transcription via two distinct mechanisms: indirect promotion of the activity of transcription factors by inactivation of the COP1/SPA E3 ligase complex or direct activation or inactivation of at least two sets of basic helix-loop-helix transcription factor families by physical interaction. Hence, CRYs govern intricate mechanisms that modulate activities of transcription factors to regulate multiple aspects of blue light-responsive photomorphogenesis. Here, we review recent progress in dissecting the pathways of CRY signaling and discuss accumulating evidence that shows how CRYs regulate broad physiological responses to blue light.

Indexed as

LightArabidopsisBasic Helix-Loop-Helix ProteinsColorCryptochromesGene Expression Regulation, PlantSignal TransductionTranscription, GeneticBasic Helix-Loop-Helix ProteinsCryptochromes

Identifiers

PMID27861972
PMCPMC6167254
OpenAlexW2555186218

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.