Evidence map›Paper›PMID 27861619›Full record

ArticlePloS one2016

A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer.

Mohammad Razuanul Hoque, Toru Ishizuka, Keiichi Inoue, Rei Abe-Yoshizumi, Hiroyuki Igarashi, Takaaki Mishima, Hideki Kandori, Hiromu Yawo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. KInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Energetics and dynamics of a light-driven sodium-pumping rhodopsin.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Mohammad Razuanul HoqueDepartment of Developmental Biology and Neuroscience, Tohoku University Graduate School of Life Sciences, Sendai, 980-8577, Japan.
Toru IshizukaDepartment of Developmental Biology and Neuroscience, Tohoku University Graduate School of Life Sciences, Sendai, 980-8577, Japan.
Keiichi InoueDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Showa-ku, Nagoya, 466-8555, Japan.
Rei Abe-YoshizumiDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Showa-ku, Nagoya, 466-8555, Japan.
Hiroyuki IgarashiDepartment of Physiology and Pharmacology, Center for Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8577, Japan.
Takaaki MishimaDepartment of Developmental Biology and Neuroscience, Tohoku University Graduate School of Life Sciences, Sendai, 980-8577, Japan.
Hideki KandoriDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Showa-ku, Nagoya, 466-8555, Japan.
Hiromu YawoDepartment of Developmental Biology and Neuroscience, Tohoku University Graduate School of Life Sciences, Sendai, 980-8577, Japan.ORCID http://orcid.org/0000-0002-4299-3288
Tohoku University · JPNagoya Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the progress of optogenetics, the activities of genetically identified neurons can be optically silenced to determine whether the neurons in question are necessary for the network performance of the behavioral expression. This logical induction is expected to be improved by the application of the Na+ pump rhodopsins (NaRs), which hyperpolarize the membrane potential with negligible influence on the ionic/pH balance. Here, we made several chimeric NaRs between two NaRs, KR2 and IaNaR from Krokinobacter eikastus and Indibacter alkaliphilus, respectively. We found that one of these chimeras, named I1K6NaR, exhibited some improvements in the membrane targeting and photocurrent properties over native NaRs. The I1K6NaR-expressing cortical neurons were stably silenced by green light irradiation for a certain long duration. With its rapid kinetics and voltage dependency, the photoactivation of I1K6NaR would specifically counteract the generation of action potentials with less hyperpolarization of the neuronal membrane potential than KR2.

Indexed as

OptogeneticsAmino Acid SequenceAnimalsBiological TransportCell LineCytophagaElectrophysiological PhenomenaGene ExpressionIonsLightMembrane PotentialsNeuronsRatsRhodopsinIonsRhodopsin

Identifiers

PMID27861619
PMCPMC5115807
OpenAlexW2552986984

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.