Evidence map›Paper›PMID 27860341›Full record

ArticleMicrobiologyOpen2017

Biostimulation and microbial community profiling reveal insights on RDX transformation in groundwater.

Dongping Wang, Hakim Boukhalfa, Oana Marina, Doug S Ware, Tim J Goering, Fengjie Sun, Hajnalka E Daligault, Chien-Chi Lo, Momchilo Vuyisich, Shawn R Starkenburg

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Dongping WangEarth Systems Observations EES-14, Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Hakim BoukhalfaEarth Systems Observations EES-14, Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Oana MarinaEarth Systems Observations EES-14, Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Doug S WareEarth Systems Observations EES-14, Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Tim J GoeringEnvironmental Programs ADEP, Los Alamos National Laboratory, Los Alamos, NM, USA.
Fengjie SunSchool of Science and Technology, Georgia Gwinnett College, Lawrenceville, GA, USA.
Hajnalka E DaligaultBioenergy and Biome Sciences, Biology Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Chien-Chi LoBioenergy and Biome Sciences, Biology Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Momchilo VuyisichBioenergy and Biome Sciences, Biology Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Shawn R StarkenburgBioenergy and Biome Sciences, Biology Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Los Alamos National Laboratory · USGwinnett College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) is a high explosive released to the environment as a result of weapons manufacturing and testing worldwide. At Los Alamos National Laboratory, the Technical Area (TA) 16 260 Outfall discharged high-explosives-bearing water from a high-explosives-machining facility to Cañon de Valle during 1951 through 1996. These discharges served as a primary source of high-explosives and inorganic-element contamination in the area. Data indicate that springs, surface water, alluvial groundwater, and perched-intermediate groundwater contain explosive compounds, including RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine); HMX (octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine); and TNT (2,4,6-trinitrotoluene). RDX has been detected in the regional aquifer in several wells, and a corrective measures evaluation is planned to identify remedial alternatives to protect the regional aquifer. Perched-intermediate groundwater at Technical Area 16 is present at depths from 650 ft to 1200 ft bgs. In this study, we examined the microbial diversity in a monitoring well completed in perched-intermediate groundwater contaminated by RDX, and examined the response of the microbial population to biostimulation under varying geochemical conditions. Results show that the groundwater microbiome was dominated by Actinobacteria and Proteobacteria. A total of 1,605 operational taxonomic units (OTUs) in 96 bacterial genera were identified. Rhodococcus was the most abundant genus (30.6%) and a total of 46 OTUs were annotated as Rhodococcus. One OTU comprising 25.2% of total sequences was closely related to a RDX -degrading strain R. erythropolis HS4. A less abundant OTU from the Pseudomonas family closely related to RDX-degrading strain P. putida II-B was also present. Biostimulation significantly enriched Proteobacteria but decreased/eliminated the population of Actinobacteria. Consistent with RDX degradation, the OTU closely related to the RDX-degrading P. putida strain II-B was specifically enriched in the RDX-degrading samples. Analysis of the accumulation of RDX-degradation products reveals that during active RDX degradation, there is a transient increase in the concentration of the degradation products MNX, DNX, TNX, and NDAB. The accumulation of these degradation products suggests that RDX is degraded via sequential reduction of the nitro functional groups followed by abiotic ring-cleavage. The results suggest that strict anaerobic conditions are needed to stimulate RDX degradation under the TA-16 site-specific conditions.

Indexed as

ActinobacteriaBiodegradation, EnvironmentalGroundwaterMicrobiotaPhylogenyProteobacteriaRNA, Ribosomal, 16STriazinesWater MicrobiologyWater Pollution, ChemicalcycloniteRNA, Ribosomal, 16STriazinesbiodegradationbioremediationmicrobial structurepseudomonaswater

Identifiers

PMID27860341
PMCPMC5387309
OpenAlexW2555910528

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.