Evidence map›Paper›PMID 27859784›Full record

ArticleMolecular microbiology2017

Membrane skeletal association and post-translational allosteric regulation of Toxoplasma gondii GAPDH1.

Rashmi Dubey, Bart L Staker, Ian T Foe, Matthew Bogyo, Peter J Myler, Huân M Ngô, Marc-Jan Gubbels

Abstract read
In one paragraph

Article in Molecular microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
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  10. CSGID Solves Structures and Identifies Phenotypes for Five Enzymes inFrontiers in cellular and infection microbiology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rashmi DubeyDepartment of Biology, Boston College, MA, 02467, USA.
Bart L StakerSeattle Structural Genomics Center for Infectious Disease, Seattle, WA, 98109, USA.
Ian T FoeDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, 55324, USA.
Matthew BogyoDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, 55324, USA.
Peter J MylerSeattle Structural Genomics Center for Infectious Disease, Seattle, WA, 98109, USA.
Huân M NgôCenter for Structural Genomics of Infectious Disease, Northwestern University, Chicago, IL, 60611, USA.
Marc-Jan GubbelsDepartment of Biology, Boston College, MA, 02467, USA.

Funding

MOLECULAR BASIS OF HOST-PARASITE INTERACTIONT32AI007328 · NIAID · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 1987 to 2026
$11.9M
Equipment supplement for Chemical methods to study protein palmitoylation pathwaysR01GM111703 · NIGMS · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2014 to 2017
$1.6M
Cytoskeleton scaffold assembly in Toxoplasma gondiiR01AI081924 · NIAID · BOSTON COLLEGE · PI GUBBELS, MARC-JAN · 2009 to 2012
$1.4M
Dissecting the mechanism and regulation of Toxoplasma cytokinesisR56AI110690 · NIAID · BOSTON COLLEGE · PI GUBBELS, MARC-JAN · 2015 to 2015
$484k
HSRD VA RRP 12-175NIAID NIH HHS HHSN272200700057CNIAID NIH HHS HHSN272200700058CNIAID NIH HHS HHSN272201200025CNIAID NIH HHS HHSN272201200026CNIAID NIH HHS R01 AI081924NIAID NIH HHS R56 AI110690NIAID NIH HHS T32 AI007328NIGMS NIH HHS R01 GM111703
6 · The paper itself

Abstract

When Toxoplasma gondii egresses from the host cell, glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH1), which is primary a glycolysis enzyme but actually a quintessential multifunctional protein, translocates to the unique cortical membrane skeleton. Here, we report the 2.25 Å resolution crystal structure of the GAPDH1 holoenzyme in a quaternary complex providing the basis for the molecular dissection of GAPDH1 structure-function relationships Knockdown of GAPDH1 expression and catalytic site disruption validate the essentiality of GAPDH1 in intracellular replication but we confirmed that glycolysis is not strictly essential. We identify, for the first time, S-loop phosphorylation as a novel, critical regulator of enzymatic activity that is consistent with the notion that the S-loop is critical for cofactor binding, allosteric activation and oligomerization. We show that neither enzymatic activity nor phosphorylation state correlate with the ability to translocate to the cortex. However, we demonstrate that association of GAPDH1 with the cortex is mediated by the N-terminus, likely palmitoylation. Overall, glycolysis and cortical translocation are functionally decoupled by post-translational modifications.

Indexed as

Protein Processing, Post-TranslationalAllosteric RegulationAmino Acid SequenceApoptosisCrystallography, X-RayGlyceraldehyde-3-Phosphate DehydrogenasesGlycolysisLipoylationPhosphorylationProtein Structure, QuaternaryProtein Structure, SecondaryProtein TransportProtozoan Proteinsrab2 GTP-Binding ProteinStructure-Activity RelationshipToxoplasmaGlyceraldehyde-3-Phosphate DehydrogenasesProtozoan Proteinsrab2 GTP-Binding Protein

Identifiers

PMID27859784
PMCPMC5296235

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.