Evidence map›Paper›PMID 27858752›Full record

ArticleJournal of neuromuscular diseases2015

An Antibody to Detect Alanine-Expanded PABPN1: A New Tool to Study Oculopharyngeal Muscular Dystrophy.

Katherine E Vest, Luciano H Apponi, Ayan Banerjee, Grace K Pavlath, Anita H Corbett

Open access · bronzeAbstract read
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Article in Journal of neuromuscular diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katherine E VestDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, USA.
Luciano H ApponiDepartment of Pharmacology, Emory University School of Medicine, Atlanta, GA, USA.
Ayan BanerjeeDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, USA.
Grace K PavlathDepartment of Pharmacology, Emory University School of Medicine, Atlanta, GA, USA.
Anita H CorbettDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, USA.
Emory University · US

Funding

Muscle-Specific Basis of OPMDR01AR061987 · NIAMS · EMORY UNIVERSITY · PI CORBETT, ANITA H. · 2011 to 2021
$3.4M
A Knockin Mouse Model for Oculopharyngeal Muscular DystrophyR21NS084870 · NINDS · EMORY UNIVERSITY · PI CORBETT, ANITA H., PAVLATH, GRACE K · 2013 to 2014
$440k
Myogenesis and RNA Biogenesis in a Mouse Model of OPMDF32AR068207 · NIAMS · EMORY UNIVERSITY · PI VEST, KATHERINE ELIZABETH · 2016 to 2018
$150k
NIAMS NIH HHS F32 AR068207NIAMS NIH HHS R01 AR061987NINDS NIH HHS R21 NS084870
6 · The paper itself

Abstract

backgroundOculopharyngeal muscular dystrophy (OPMD), a late onset disorder affecting specific skeletal muscles, is caused by a (GCG)n expansion mutation in the gene encoding the mRNA processing protein, polyadenylate binding protein nuclear 1 (PABPN1). The expansion in PABPN1 leads to an increase in a stretch of N-terminal alanine residues in the PABPN1 protein from the normal 10 to 12-18. Given this modest change, detection of mutant protein has not been possible without the use of tagged constructs.

objectiveWe sought to generate a polyclonal antibody that recognizes alanine-expanded but not wild type PABPN1 with the goal of making possible analysis of expression and localization of alanine-expanded PABPN1.

methodsWe immunized rabbits with a GST-tagged alanine peptide and tested the resulting serum against alanine-expanded PABPN1 expressed in cell culture as well as in animal models of OPMD.

resultsThe resulting α-alanine antibody detected PABPN1 proteins that contained 14 or more alanine residues. Importantly, the α-alanine antibody could be used to detect alanine-expanded PABPN1 in muscles from either a mouse or Drosophila model of OPMD.

conclusionsThis α-alanine antibody provides a new tool that will allow for more in-depth study of how alanine expansion affects aggregation, localization, and steady-state levels of alanine-expanded PABPN1 levels in vivo, providing new insight into the molecular mechanisms underlying OPMD.

Indexed as

alanine expansionantibodymuscle diseaseoculopharyngeal muscular dystrophyPABPN1

Identifiers

PMID27858752
PMCPMC5207656
OpenAlexW2180854740

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.