Evidence map›Paper›PMID 27857720›Full record

ArticleFrontiers in plant science2016

Genome-Wide Divergence and Linkage Disequilibrium Analyses for

Padma Nimmakayala, Venkata L Abburi, Thangasamy Saminathan, Aldo Almeida, Brittany Davenport, Joshua Davidson, C V Chandra Mohan Reddy, Gerald Hankins, Andreas Ebert, Doil Choi and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. The History of Lentil (Frontiers in plant science · 2021
    Article
  7. Article
  8. Article
  9. Genome-Wide Correlation of 36 Agronomic Traits in the 287 Pepper (International journal of molecular sciences · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Padma NimmakayalaDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Venkata L AbburiDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Thangasamy SaminathanDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Aldo AlmeidaDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Brittany DavenportDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Joshua DavidsonDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
C V Chandra Mohan ReddyDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Gerald HankinsDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
Andreas EbertGenetic Resources and Seed Unit, Asian Vegetable Research and Development Center-The World Vegetable Center Tainan, Taiwan.
Doil ChoiDepartment of Plant Science, Plant Genomics and Breeding Institute, College of Agriculture and Life Sciences, Seoul National University Seoul, South Korea.
John StommelGenetic Improvement of Fruits and Vegetables Laboratory (United States Department of Agriculture, Agricultural Research Service) Beltsville, MD, USA.
Umesh K ReddyDepartment of Biology, Gus R. Douglass Institute, West Virginia State University Institute, WV, USA.
West Virginia State University · USSeoul National University · KRUnited States Department of Agriculture · USWorld Vegetable Center · TW

Funding

WVU &MU NEW FACULTY GRANTSP20RR016477 · NCRR · MARSHALL UNIVERSITY · PI RANKIN, GARY O · 2001 to 2011
$35.5M
NCRR NIH HHS P20 RR016477
6 · The paper itself

Abstract

Principal component analysis (PCA) with 36,621 polymorphic genome-anchored single nucleotide polymorphisms (SNPs) identified collectively for

Indexed as

genome-wide association mappinggenotyping by sequencinghaplotypinglinkage disequilibriumpeduncle lengthpopulation structure

Identifiers

PMID27857720
PMCPMC5093146
OpenAlexW2546479487

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.