Evidence map›Paper›PMID 27857118›Full record

ArticleNature communications2016

Lineage-specific roles of the cytoplasmic polyadenylation factor CPEB4 in the regulation of melanoma drivers.

Eva Pérez-Guijarro, Panagiotis Karras, Metehan Cifdaloz, Raúl Martínez-Herranz, Estela Cañón, Osvaldo Graña, Celia Horcajada-Reales, Direna Alonso-Curbelo, Tonantzin G Calvo, Gonzalo Gómez-López and 12 more

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
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  9. Article
  10. CSDE1 Intracellular Distribution as a Biomarker of Melanoma Prognosis.International journal of molecular sciences · 2024
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Eva Pérez-GuijarroMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Panagiotis KarrasMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Metehan CifdalozMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Raúl Martínez-HerranzMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Estela CañónMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Osvaldo GrañaBioinformatics Unit (CNIO), Madrid 28029, Spain.
Celia Horcajada-RealesDepartment of Dermatology, Hospital Gregorio Marañón, Madrid 28003, Spain.
Direna Alonso-CurbeloMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Tonantzin G CalvoMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.
Gonzalo Gómez-LópezBioinformatics Unit (CNIO), Madrid 28029, Spain.
Nicolas BelloraDepartment of Experimental and Health Sciences, Universidad Pompeu Fabra, Barcelona 08002, Spain.
Erica Riveiro-FalkenbachInstituto de Investigación i+12, Hospital 12 de Octubre, Medical School, Universidad Complutense, Madrid 28041, Spain.
Pablo L Ortiz-RomeroInstituto de Investigación i+12, Hospital 12 de Octubre, Medical School, Universidad Complutense, Madrid 28041, Spain.
José L Rodríguez-PeraltoInstituto de Investigación i+12, Hospital 12 de Octubre, Medical School, Universidad Complutense, Madrid 28041, Spain.
Lorena MaestreMonoclonal Antibodies Unit, Biotechnology Programme (CNIO), Madrid 28029, Spain.
Giovanna RoncadorMonoclonal Antibodies Unit, Biotechnology Programme (CNIO), Madrid 28029, Spain.
Juan C de Agustín AsensioDepartment of Pediatric Surgery, Hospital Gregorio Marañón, Madrid 28003, Spain.
Colin R GodingInstitute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7DQ, Spain.
Eduardo EyrasDepartment of Experimental and Health Sciences, Universidad Pompeu Fabra, Barcelona 08002, Spain.
Diego MegíasConfocal Microscopy Unit, (CNIO) Madrid 28029, Spain.
Raúl MéndezInstitució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona 08010, Spain.
María S SoengasMelanoma Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain.

Funding

Tumor Assessment CoreP01CA128814 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SMITH, JEFFREY W · 2009 to 2020
$19.1M
NCI NIH HHS P01 CA128814
6 · The paper itself

Abstract

Nuclear 3'-end-polyadenylation is essential for the transport, stability and translation of virtually all eukaryotic mRNAs. Poly(A) tail extension can also occur in the cytoplasm, but the transcripts involved are incompletely understood, particularly in cancer. Here we identify a lineage-specific requirement of the cytoplasmic polyadenylation binding protein 4 (CPEB4) in malignant melanoma. CPEB4 is upregulated early in melanoma progression, as defined by computational and histological analyses. Melanoma cells are distinct from other tumour cell types in their dependency on CPEB4, not only to prevent mitotic aberrations, but to progress through G1/S cell cycle checkpoints. RNA immunoprecipitation, sequencing of bound transcripts and poly(A) length tests link the melanoma-specific functions of CPEB4 to signalling hubs specifically enriched in this disease. Essential in these CPEB4-controlled networks are the melanoma drivers MITF and RAB7A, a feature validated in clinical biopsies. These results provide new mechanistic links between cytoplasmic polyadenylation and lineage specification in melanoma.

Indexed as

AnimalsCell CycleCell Line, TumorGene Expression Regulation, NeoplasticGene SilencingHumansMelanomaMiceNeoplasms, ExperimentalRNA-Binding ProteinsRNA, MessengerCPEB4 protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID27857118
PMCPMC5120223

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.