Evidence map›Paper›PMID 27857071›Full record

ArticleNature communications2016

An elastic element in the protocadherin-15 tip link of the inner ear.

Raul Araya-Secchi, Brandon L Neel, Marcos Sotomayor

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Review
  2. Cryo-EM reveals a right-handed double-helix dimer architecture of PCDH15.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Nanomechanics of wild-type and mutant dimers of the inner-ear tip-link protein protocadherin 15.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. In situ structure of intestinal apical surface reveals nanobristles on microvilli.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Mechanotransduction in mammalian sensory hair cells.Molecular and cellular neurosciences · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Usher Syndrome: Genetics of a Human Ciliopathy.International journal of molecular sciences · 2021
    Review
  19. Review
  20. Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Raul Araya-SecchiDepartment of Chemistry and Biochemistry, The Ohio State University, 484 W 12th Avenue, Columbus, Ohio 43210, USA.ORCID 0000-0002-4872-3553
Brandon L NeelDepartment of Chemistry and Biochemistry, The Ohio State University, 484 W 12th Avenue, Columbus, Ohio 43210, USA.
Marcos SotomayorDepartment of Chemistry and Biochemistry, The Ohio State University, 484 W 12th Avenue, Columbus, Ohio 43210, USA.ORCID 0000-0002-3333-1805

Funding

TrainingP41GM103712 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI AYOOB, JOSEPH C · 2012 to 2021
$16.3M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Cellular, molecular, and biochemical sciences training grantT32GM086252 · NIGMS · OHIO STATE UNIVERSITY · PI JACKMAN, JANE ELIZABETH, MUSIER-FORSYTH, KARIN M · 2011 to 2020
$2.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
FORCE SPECTROSCOPY AND STRUCTURAL BIOLOGY OF HAIR-CELL TIP LINKSR00DC012534 · NIDCD · OHIO STATE UNIVERSITY · PI SOTOMAYOR, MARCOS · 2013 to 2015
$745k
FORCE SPECTROSCOPY AND STRUCTURAL BIOLOGY OF HAIR-CELL TIP LINKSK99DC012534 · NIDCD · HARVARD MEDICAL SCHOOL · PI SOTOMAYOR, MARCOS · 2012 to 2012
$96k
NCRR NIH HHS S10 RR029205NIDCD NIH HHS K99 DC012534NIDCD NIH HHS R00 DC012534NIGMS NIH HHS P41 GM103403NIGMS NIH HHS P41 GM103712NIGMS NIH HHS T32 GM086252
6 · The paper itself

Abstract

Tip link filaments convey force and gate inner-ear hair-cell transduction channels to mediate perception of sound and head movements. Cadherin-23 and protocadherin-15 form tip links through a calcium-dependent interaction of their extracellular domains made of multiple extracellular cadherin (EC) repeats. These repeats are structurally similar, but not identical in sequence, often featuring linkers with conserved calcium-binding sites that confer mechanical strength to them. Here we present the X-ray crystal structures of human protocadherin-15 EC8-EC10 and mouse EC9-EC10, which show an EC8-9 canonical-like calcium-binding linker, and an EC9-10 calcium-free linker that alters the linear arrangement of EC repeats. Molecular dynamics simulations and small-angle X-ray scattering experiments support this non-linear conformation. Simulations also suggest that unbending of EC9-10 confers some elasticity to otherwise rigid tip links. The new structure provides a first view of protocadherin-15's non-canonical EC linkers and suggests how they may function in inner-ear mechanotransduction, with implications for other cadherins.

Indexed as

Amino Acid SequenceAnimalsCadherin Related ProteinsCadherinsComputer SimulationHair Cells, Auditory, InnerHumansMechanotransduction, CellularMiceModels, BiologicalModels, MolecularProtein ConformationProtein PrecursorsCadherin Related ProteinsCadherinsCDHR15, humanCDHR15 protein, mouseProtein Precursors

Identifiers

PMID27857071
PMCPMC5120219

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.