Evidence map›Paper›PMID 27857054›Full record

ArticleCell research2016

Type I CRISPR-Cas targets endogenous genes and regulates virulence to evade mammalian host immunity.

Rongpeng Li, Lizhu Fang, Shirui Tan, Min Yu, Xuefeng Li, Sisi He, Yuquan Wei, Guoping Li, Jianxin Jiang, Min Wu

Open access · bronzeAbstract read
In one paragraph

Article in Cell research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 120 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. TheEcoSal Plus · 2025
    Review
  5. Genome Mining ofPathogens (Basel, Switzerland) · 2025
    Article
  6. Article
  7. Anti-QS Strategies AgainstMicroorganisms · 2025
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. CRISPRJournal of oral microbiology · 2025
    Article
  13. Article
  14. Article
  15. Molecular Aspects of the Functioning of Pathogenic Bacteria Biofilm Based onInternational journal of molecular sciences · 2024
    Review
  16. Article
  17. Distribution characteristics of theInfection and immunity · 2024
    Article
  18. Review
  19. Endogenous Type I-C CRISPR-Cas system ofFrontiers in microbiology · 2024
    Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Rongpeng LiDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Lizhu FangDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Shirui TanDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Min YuDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Xuefeng LiDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Sisi HeDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
Yuquan WeiState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu, Sichuan 610041, China.
Guoping LiInflammations & Allergic Diseases Research Unit, Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan 646004, China.
Jianxin JiangState Key Laboratory of Trauma, Burns and Combined Injury, Institute of Surgery Research, Daping Hospital, Third Military Medical University, Chongqing 400042, China.
Min WuDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, ND 58203-9061, USA.
University of North Dakota · USSichuan University · CNAffiliated Hospital of Southwest Medical University · CNArmy Medical University · CN

Funding

Research CoresP20GM103442 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI Chris Jurgens · 2012 to 2026
$53.0M
Yersina perstis interactions with macrophagesP20GM113123 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI BRADLEY, DAVID S. · 2016 to 2025
$19.9M
Pilot Projects CoreP30GM103329 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI GEIGER, JONATHAN DAVID · 2012 to 2016
$5.1M
Lung innate immunity against bacterial infectionR01AI109317 · NIAID · UNIVERSITY OF NORTH DAKOTA · PI WU, MIN · 2014 to 2018
$1.7M
Lung epithelium collaborates with alveolar macrophages in host defenseR15AI101973 · NIAID · UNIVERSITY OF NORTH DAKOTA · PI WU, MIN · 2012 to 2012
$414k
NIAID NIH HHS R01 AI109317NIAID NIH HHS R15 AI101973NIGMS NIH HHS P20 GM103442NIGMS NIH HHS P20 GM113123NIGMS NIH HHS P30 GM103329
6 · The paper itself

Abstract

Clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated (Cas) systems in bacteria and archaea provide adaptive immunity against invading foreign nucleic acids. Previous studies suggest that certain bacteria employ their Type II CRISPR-Cas systems to target their own genes, thus evading host immunity. However, whether other CRISPR-Cas systems have similar functions during bacterial invasion of host cells remains unknown. Here we identify a novel role for Type I CRISPR-Cas systems in evading host defenses in Pseudomonas aeruginosa strain UCBPP-PA14. The Type I CRISPR-Cas system of PA14 targets the mRNA of the bacterial quorum-sensing regulator LasR to dampen the recognition by toll-like receptor 4, thus diminishing the pro-inflammatory responses of the host in cell and mouse models. Mechanistically, this nuclease-mediated RNA degradation requires a "5'-GGN-3'" recognition motif in the target mRNA, and HD and DExD/H domains in Cas3 of the Type I CRISPR-Cas system. As LasR and Type I CRISPR-Cas systems are ubiquitously present in bacteria, our findings elucidate an important common mechanism underlying bacterial virulence.

Indexed as

Gene TargetingAnimalsBacterial ProteinsBase SequenceBronchoalveolar Lavage FluidCells, CulturedCRISPR-Associated ProteinsCRISPR-Cas SystemsFemaleImmunity, InnateInflammationLungMacrophagesMiceMice, Inbred C57BLNucleotide MotifsBacterial ProteinsCRISPR-Associated ProteinsLasR protein, Pseudomonas aeruginosaRNA, MessengerTrans-Activators

Identifiers

PMID27857054
PMCPMC5143421
OpenAlexW2550377275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.