Evidence map›Paper›PMID 27856324›Full record

ArticleExperimental hematology2017

MLL-AF4 binds directly to a BCL-2 specific enhancer and modulates H3K27 acetylation.

Laura Godfrey, Jon Kerry, Ross Thorne, Emmanouela Repapi, James O J Davies, Marta Tapia, Erica Ballabio, Jim R Hughes, Huimin Geng, Marina Konopleva and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Experimental hematology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Emerging genomic biomarkers in diagnosis and classification of T-cell acute lymphoblastic leukemia.Hematology. American Society of Hematology. Education Program · 2025
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  15. Epigenetic Control of Infant B Cell Precursor Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Laura GodfreyWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Jon KerryWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Ross ThorneWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Emmanouela RepapiWeatherall Institute of Molecular Medicine, Computational Biology Research Group, University of Oxford, Headington, Oxford, UK.
James O J DaviesWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Marta TapiaWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Erica BallabioWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Jim R HughesWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK.
Huimin GengDepartment of Laboratory Medicine, University of California San Francisco, San Francisco, CA.
Marina KonoplevaDepartment of Leukemia, University of Texas MD Anderson Cancer Center, Houston, TX.
Thomas A MilneWeatherall Institute of Molecular Medicine, MRC Molecular Haematology Unit, University of Oxford, Headington, Oxford, UK. Electronic address: thomas.milne@imm.ox.ac.uk.
MRC Weatherall Institute of Molecular Medicine · GBUniversity of Oxford · GBThe University of Texas MD Anderson Cancer Center · USUniversity of California, San Francisco · US

Funding

Medical Research Council 4050189188Medical Research Council MC_UU_00016/14Medical Research Council MC_UU_00016/6Medical Research Council MC_UU_12009/15Medical Research Council MC_UU_12009/6Medical Research Council MR/N00969X/1Wellcome TrustWellcome Trust 090532/Z/09/ZWellcome Trust 098931/Z/12/ZWellcome Trust 106130/Z/14/Z
6 · The paper itself

Abstract

Survival rates for children and adults carrying mutations in the Mixed Lineage Leukemia (MLL) gene continue to have a very poor prognosis. The most common MLL mutation in acute lymphoblastic leukemia is the t(4;11)(q21;q23) chromosome translocation that fuses MLL in-frame with the AF4 gene producing MLL-AF4 and AF4-MLL fusion proteins. Previously, we found that MLL-AF4 binds to the BCL-2 gene and directly activates it through DOT1L recruitment and increased H3K79me2/3 levels. In the study described here, we performed a detailed analysis of MLL-AF4 regulation of the entire BCL-2 family. By measuring nascent RNA production in MLL-AF4 knockdowns, we found that of all the BCL-2 family genes, MLL-AF4 directly controls the active transcription of both BCL-2 and MCL-1 and also represses BIM via binding of the polycomb group repressor 1 (PRC1) complex component CBX8. We further analyzed MLL-AF4 activation of the BCL-2 gene using Capture-C and identified a BCL-2-specific enhancer, consisting of two clusters of H3K27Ac at the 3' end of the gene. Loss of MLL-AF4 activity results in a reduction of H3K79me3 levels in the gene body and H3K27Ac levels at the 3' BCL-2 enhancer, revealing a novel regulatory link between these two histone marks and MLL-AF4-mediated activation of BCL-2.

Indexed as

Enhancer Elements, GeneticAcetylationBcl-2-Like Protein 11Cell Cycle ProteinsCell Line, TumorChromatin ImmunoprecipitationGene Expression ProfilingGene Expression Regulation, LeukemicHigh-Throughput Nucleotide SequencingHistonesHumansMyeloid Cell Leukemia Sequence 1 ProteinMyeloid-Lymphoid Leukemia ProteinOncogene Proteins, FusionPolycomb Repressive Complex 1Promoter Regions, GeneticBcl-2-Like Protein 11CBX8 protein, humanCell Cycle ProteinsHistonesMLL-AF4 fusion protein, humanMyeloid Cell Leukemia Sequence 1 ProteinMyeloid-Lymphoid Leukemia ProteinOncogene Proteins, FusionPolycomb Repressive Complex 1PRC1 protein, humanProto-Oncogene Proteins c-bcl-2

Identifiers

PMID27856324
PMCPMC5333536
OpenAlexW2549480200

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.