Evidence map›Paper›PMID 27855785›Full record

ArticleeLife2016

Sec24 phosphorylation regulates autophagosome abundance during nutrient deprivation.

Saralin Davis, Juan Wang, Ming Zhu, Kyle Stahmer, Ramya Lakshminarayan, Majid Ghassemian, Yu Jiang, Elizabeth A Miller, Susan Ferro-Novick

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 91 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. The autophagy-specific exocyst subcomplex contributes to phagophore assembly site integrity by promoting phagophore expansion.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. bioRxiv : the preprint server for biology · 2024
    Article
  11. Autophagy in plants.Autophagy reports · 2024
    Review
  12. ER exit in physiology and disease.Frontiers in molecular biosciences · 2024
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Saralin DavisDepartment of Cellular and Molecular Medicine, University of California, San Diego, San Diego, United States.ORCID 0000-0002-9834-8683
Juan WangDepartment of Cellular and Molecular Medicine, University of California, San Diego, San Diego, United States.
Ming ZhuDepartment of Cellular and Molecular Medicine, University of California, San Diego, San Diego, United States.
Kyle StahmerDepartment of Biological Sciences, Columbia University, New York, United States.
Ramya LakshminarayanDepartment of Biological Sciences, Columbia University, New York, United States.
Majid GhassemianDepartment of Chemistry and Biochemistry, University of California, San Diego, San Diego, United States.
Yu JiangDepartment of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, United States.
Elizabeth A MillerDepartment of Biological Sciences, Columbia University, New York, United States.
Susan Ferro-NovickDepartment of Cellular and Molecular Medicine, University of California, San Diego, San Diego, United States.ORCID 0000-0001-8714-7352
University of California San Diego · USColumbia University · USMRC Laboratory of Molecular Biology · GBUniversity of Pittsburgh · US

Funding

CELLULAR AND MOLECULAR FOUNDATIONS OF BIOMEDICAL SCIENCET32GM008798 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI PRYWES, RON M · 2001 to 2018
$6.3M
Molecular mechanisms of cargo capture into ER-derived transport vesiclesR01GM085089 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI BULINSKI, JEANNETTE CHLOE, MILLER, ELIZABETH A. · 2008 to 2016
$2.4M
The role of a CK1 kinase in membrane trafficR01GM114111 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FERRO-NOVICK, SUSAN · 2015 to 2018
$1.5M
The contribution of the secretory pathway to macroautophagyR01GM115422 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FERRO-NOVICK, SUSAN · 2016 to 2018
$1.1M
Acquisition of an Orbitrap Elite with ETDS10OD021724 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2016 to 2016
$600k
The role of arachidonic acid in estrogen mediated mTOR activationR21CA169186 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JIANG, YU · 2013 to 2014
$361k
Medical Research Council MC_UP_1201/10NCI NIH HHS R21 CA169186NIGMS NIH HHS R01 GM085089NIGMS NIH HHS R01 GM114111NIGMS NIH HHS R01 GM115422NIGMS NIH HHS T32 GM008798NIH HHS S10 OD021724
6 · The paper itself

Abstract

Endoplasmic Reticulum (ER)-derived COPII coated vesicles constitutively transport secretory cargo to the Golgi. However, during starvation-induced stress, COPII vesicles have been implicated as a membrane source for autophagosomes, distinct organelles that engulf cellular components for degradation by macroautophagy (hereafter called autophagy). How cells regulate core trafficking machinery to fulfill dramatically different cellular roles in response to environmental cues is unknown. Here we show that phosphorylation of conserved amino acids on the membrane-distal surface of the

Indexed as

Organelle BiogenesisProtein Processing, Post-TranslationalAutophagosomesAutophagy-Related ProteinsCasein Kinase IMembrane ProteinsPhosphorylationProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsATG9 protein, S cerevisiaeAutophagy-Related ProteinsCasein Kinase IHRR25 protein, S cerevisiaeMembrane ProteinsSaccharomyces cerevisiae ProteinsSEC24 protein, S cerevisiaeAutophagycell biologyCOPII vesiclesHrr25S. cerevisiaeSecretory pathway

Identifiers

PMID27855785
PMCPMC5148606
OpenAlexW2550549670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.