ArticleBMC genomics2016
Analysis of transcriptome in hickory (Carya cathayensis), and uncover the dynamics in the hormonal signaling pathway during graft process.
Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 63 citations in OpenAlex.
- Molecular mechanisms driving the success of grafting impacted by walnut rootstock.BMC genomics · 2026Article
- Here comes the sun: integration of light, temperature, and auxin during herbaceous plant grafting.Planta · 2025Review
- The biology of grafting and its applications in studying information exchange between plants.Nature plants · 2025Review
- Infection mechanism of Botryosphaeria dothidea and the disease resistance strategies of Chinese hickory (Carya cathayensis).BMC plant biology · 2024Article
- Genome-wide identification and expression analysis ofFrontiers in plant science · 2022Article
- Article
- Sugars promote graft union development in the heterograft of cucumber onto pumpkin.Horticulture research · 2021Article
- Conserved Regulatory Pathways for Stock-Scion Healing Revealed by Comparative Analysis of Arabidopsis and Tomato Grafting Transcriptomes.Frontiers in plant science · 2021Article
- Article
- Identification and expression analysis of auxin-responsive GH3 family genes in Chinese hickory (Carya cathayensis) during grafting.Molecular biology reports · 2020Article
- Identifying Molecular Markers of Successful Graft Union Formation and Compatibility.Frontiers in plant science · 2020Review
- Article
- De novo Comparative Transcriptome Analysis of Genes Differentially Expressed in the Scion of Homografted and Heterografted Tomato Seedlings.Scientific reports · 2019Article
- Quantitative succinyl-proteome profiling of Chinese hickory (Carya cathayensis) during the grafting process.BMC plant biology · 2019Article
- Gene co-expression network analysis reveals pathways associated with graft healing by asymmetric profiling in tomato.BMC plant biology · 2019Article
- Molecular Responses during Plant Grafting and Its Regulation by Auxins, Cytokinins, and Gibberellins.Biomolecules · 2019Review
- A chromosome-scale genome assembly of cucumber (Cucumis sativus L.).GigaScience · 2019Article
- Auxin transport and stem vascular reconnection - has our thinking become canalized?Annals of botany · 2019Review
- Degradation of bamboo lignocellulose by bamboo snout beetleBiotechnology for biofuels · 2019Article
- Article
Corrections and comments
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Authors and funding
10 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundHickory (Carya cathayensis), a woody plant with high nutritional and economic value, is widely planted in China. Due to its long juvenile phase, grafting is a useful technique for large-scale cultivation of hickory. To reveal the molecular mechanism during the graft process, we sequenced the transcriptomes of graft union in hickory.
resultsIn our study, six RNA-seq libraries yielded a total of 83,676,860 clean short reads comprising 4.19 Gb of sequence data. A large number of differentially expressed genes (DEGs) at three time points during the graft process were identified. In detail, 777 DEGs in the 7 d vs 0 d (day after grafting) comparison were classified into 11 enriched Gene Ontology (GO) categories, and 262 DEGs in the 14 d vs 0 d comparison were classified into 15 enriched GO categories. Furthermore, an overview of the PPI network was constructed by these DEGs. In addition, 20 genes related to the auxin-and cytokinin-signaling pathways were identified, and some were validated by qRT-PCR analysis.
conclusionsOur comprehensive analysis provides basic information on the candidate genes and hormone signaling pathways involved in the graft process in hickory and other woody plants.
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