Evidence map›Paper›PMID 27855178›Full record

ArticlePloS one2016

Molecular Models for the Core Components of the Flagellar Type-III Secretion Complex.

William R Taylor, Teige R S Matthews-Palmer, Morgan Beeby

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. High-resolution view of the type III secretion export apparatus in situ reveals membrane remodeling and a secretion pathway.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. SimGen: A General Simulation Method for Large Systems.Journal of molecular biology · 2017
    Article
  8. Algorithms for matching partially labelled sequence graphs.Algorithms for molecular biology : AMB · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

William R TaylorLaboratory of Computational Cell and Molecular Biology, Francis Crick Institute, 1 Midland Rd., London NW1 1AT, United Kingdom.ORCID http://orcid.org/0000-0003-1052-293X
Teige R S Matthews-PalmerLaboratory of Computational Cell and Molecular Biology, Francis Crick Institute, 1 Midland Rd., London NW1 1AT, United Kingdom.
Morgan BeebyDepartment of Life Sciences, Imperial College, London, United Kingdom.
The Francis Crick Institute · GBImperial College London · GB

Funding

Wellcome Trust FC001179
6 · The paper itself

Abstract

We show that by using a combination of computational methods, consistent three-dimensional molecular models can be proposed for the core proteins of the type-III secretion system. We employed a variety of approaches to reconcile disparate, and sometimes inconsistent, data sources into a coherent picture that for most of the proteins indicated a unique solution to the constraints. The range of difficulty spanned from the trivial (FliQ) to the difficult (FlhA and FliP). The uncertainties encountered with FlhA were largely the result of the greater number of helix packing possibilities allowed in a large protein, however, for FliP, there remains an uncertainty in how to reconcile the large displacement predicted between its two main helical hairpins and their ability to sit together happily across the bacterial membrane. As there is still no high resolution structural information on any of these proteins, we hope our predicted models may be of some use in aiding the interpretation of electron microscope images and in rationalising mutation data and experiments.

Indexed as

Models, BiologicalType III Secretion SystemsBacterial ProteinsComputational BiologyDatabases, GeneticEvolution, MolecularFlagellaModels, MolecularMultiprotein ComplexesStructure-Activity RelationshipWeb BrowserBacterial ProteinsMultiprotein ComplexesType III Secretion Systems

Identifiers

PMID27855178
PMCPMC5113899
OpenAlexW2554511718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.