Evidence map›Paper›PMID 27855154›Full record

ArticlePLoS computational biology2016

Error-Robust Modes of the Retinal Population Code.

Jason S Prentice, Olivier Marre, Mark L Ioffe, Adrianna R Loback, Gašper Tkačik, Michael J Berry

Erratum issuedAbstract read
In one paragraph

Article in PLoS computational biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  9. Optimal Encoding in Stochastic Latent-Variable Models.Entropy (Basel, Switzerland) · 2020
    Article
  10. Article
  11. Article
  12. Blindfold learning of an accurate neural metric.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Jason S PrenticePrinceton Neuroscience Institute, Princeton University, Princeton, NJ, United States of America.
Olivier MarreInstitut de la Vision, UMRS 968 UPMC, INSERM, Paris, France.ORCID http://orcid.org/0000-0002-0090-6190
Mark L IoffePrinceton Neuroscience Institute, Princeton University, Princeton, NJ, United States of America.ORCID http://orcid.org/0000-0002-8229-3235
Adrianna R LobackPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, United States of America.ORCID http://orcid.org/0000-0001-7007-867X
Gašper TkačikInstitute of Science and Technology Austria, Austria.
Michael J BerryPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, United States of America.

Funding

NRSA Training Grant in Quantitative NeuroscienceT32MH065214 · NIMH · PRINCETON UNIVERSITY · PI Nathaniel Douglass Daw, KENNETH A NORMAN · 2002 to 2026
$7.9M
Neural Computation in the RetinaR01EY014196 · NEI · PRINCETON UNIVERSITY · PI BERRY, MICHAEL J · 2002 to 2011
$2.8M
Neural Computation in the RetinaR56EY014196 · NEI · PRINCETON UNIVERSITY · PI BERRY, MICHAEL J · 2007 to 2007
$389k
Austrian Science Fund FWF P 25651NEI NIH HHS R01 EY014196NEI NIH HHS R56 EY014196NIMH NIH HHS T32 MH065214
6 · The paper itself

Abstract

Across the nervous system, certain population spiking patterns are observed far more frequently than others. A hypothesis about this structure is that these collective activity patterns function as population codewords-collective modes-carrying information distinct from that of any single cell. We investigate this phenomenon in recordings of ∼150 retinal ganglion cells, the retina's output. We develop a novel statistical model that decomposes the population response into modes; it predicts the distribution of spiking activity in the ganglion cell population with high accuracy. We found that the modes represent localized features of the visual stimulus that are distinct from the features represented by single neurons. Modes form clusters of activity states that are readily discriminated from one another. When we repeated the same visual stimulus, we found that the same mode was robustly elicited. These results suggest that retinal ganglion cells' collective signaling is endowed with a form of error-correcting code-a principle that may hold in brain areas beyond retina.

Indexed as

Models, NeurologicalModels, StatisticalAction PotentialsCells, CulturedComputer SimulationHumansNerve NetRetinal Ganglion CellsSynaptic TransmissionVision, Ocular

Identifiers

PMID27855154
PMCPMC5113862

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.