ArticleNature communications2016
Salinity tolerance loci revealed in rice using high-throughput non-invasive phenotyping.
Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers, 1 of them a synthesis that pooled it.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
112 citing papers in PubMed, 1 synthesis or guideline pooled it, 262 citations in OpenAlex.
- Systematic synthesis of CRISPR/Cas applications for enhancing salt tolerance in crops: a decade of progress and challenges.BMC plant biology · 2026Pooled it
- High-Throughput Phenotyping: Status and Applications in Rice Breeding.Plants (Basel, Switzerland) · 2026Review
- Harnessing artificial intelligence in plant breeding: innovations in digital phenotyping and breeding methodologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- Early screening of salt-tolerant and high-yielding rice varieties via cost-effective UAV data.Plant phenomics (Washington, D.C.) · 2026Article
- Persistent and transient QTLs underlying growth trajectory of plant height in sorghum.Journal of experimental botany · 2026Article
- From Model Plants to Staple Crops: Molecular Mechanisms of Plant Saline-Alkali Tolerance.Plants (Basel, Switzerland) · 2026Review
- From labs to field realities: a paradigm shift in rice salinity screening.Frontiers in plant science · 2026Article
- Review
- Future flooding tolerant rice germplasm: Resilience afforded beyond Sub1A gene.The plant genome · 2025Article
- Genome-wide association mapping for salinity recovery of rice seedlings grown in hydroponic and field conditions.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025Article
- Advancing Crop Resilience Through High-Throughput Phenotyping for Crop Improvement in the Face of Climate Change.Plants (Basel, Switzerland) · 2025Review
- Omics-Driven Strategies for Developing Saline-Smart Lentils: A Comprehensive Review.International journal of molecular sciences · 2024Review
- Unlocking the mystery of heterosis opens the era of intelligent rice breeding.Plant physiology · 2024Review
- Development of a Reference Transcriptome and Identification of Differentially Expressed Genes Linked to Salt Stress in Salt Marsh Grass (Plants (Basel, Switzerland) · 2024Article
- Genome-Wide Association Study of Body Conformation Traits in Tashi Goats (Animals : an open access journal from MDPI · 2024Article
- GWAS supported by computer vision identifies large numbers of candidate regulators of in planta regeneration in Populus trichocarpa.G3 (Bethesda, Md.) · 2024Article
- Genetic gains in IRRI's rice salinity breeding and elite panel development as a future breeding resource.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Regulation of root growth and elongation in wheat.Frontiers in plant science · 2024Review
- GWAS combined with linkage analysis reveals major QTLs and candidate genes of salt tolerance inFrontiers in plant science · 2024Article
- Seed quality as a proxy of climate-ready orphan legumes: the need for a multidisciplinary and multi-actor vision.Frontiers in plant science · 2024Review
52 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
High-throughput phenotyping produces multiple measurements over time, which require new methods of analyses that are flexible in their quantification of plant growth and transpiration, yet are computationally economic. Here we develop such analyses and apply this to a rice population genotyped with a 700k SNP high-density array. Two rice diversity panels, indica and aus, containing a total of 553 genotypes, are phenotyped in waterlogged conditions. Using cubic smoothing splines to estimate plant growth and transpiration, we identify four time intervals that characterize the early responses of rice to salinity. Relative growth rate, transpiration rate and transpiration use efficiency (TUE) are analysed using a new association model that takes into account the interaction between treatment (control and salt) and genetic marker. This model allows the identification of previously undetected loci affecting TUE on chromosome 11, providing insights into the early responses of rice to salinity, in particular into the effects of salinity on plant growth and transpiration.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.