Evidence map›Paper›PMID 27853144›Full record

ArticleGenes and immunity2016

HLA Class I and II alleles, heterozygosity and HLA-KIR interactions are associated with rates of genital HSV shedding and lesions.

Amalia Magaret, Lichun Dong, Mina John, Simon A Mallal, Ian James, Terri Warren, Silvana Gaudieri, David M Koelle, Anna Wald

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. The Role of Killer Ig-like Receptors in Diseases from A to Z.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Amalia MagaretVaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle WA, USA.
Lichun DongDepartment of Medicine, University of Washington, Seattle WA, USA.
Mina JohnInstitute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia 6150, Australia.
Simon A MallalInstitute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia 6150, Australia.
Ian JamesInstitute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia 6150, Australia.
Terri WarrenWestover Heights Clinic, Portland, OR, USA.
Silvana GaudieriInstitute for Immunology and Infectious Diseases, Murdoch University, Murdoch, Western Australia 6150, Australia.
David M Koelle *Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle WA, USA.
Anna Wald *Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle WA, USA.
University of Washington · USMurdoch University · AUBenaroya Research InstituteRoyal Perth Hospital · AUUniversity of Western Australia · AUWestover Heights Clinic · US

Funding

THE PERINATAL COMPLICATIONS OF ASYMPTOMATIC GENITAL HERPES SIMPLEX VIRUSP01AI030731 · NIAID · UNIVERSITY OF WASHINGTON · PI WALD, ANNA · 1991 to 2017
$34.3M
Genomic systems approach to measure HSV-1-specific T-cell dominance in humansR01AI094019 · NIAID · UNIVERSITY OF WASHINGTON · PI KOELLE, DAVID M · 2012 to 2016
$1.9M
NIAID NIH HHS P01 AI030731NIAID NIH HHS R01 AI094019
6 · The paper itself

Abstract

Variation at HLA and KIR loci is associated with the severity of viral infections. To assess associations of genital HSV-2 infection with human HLA and KIR genetic loci, we measured the frequencies of genital herpes simplex virus (HSV) DNA detection and of genital lesions in HSV-2 seropositive persons. We followed 267 HSV-2 seropositive persons who collected daily genital swabs and recorded lesions for ⩾30 days. All persons were laboratory-documented as HIV-seronegative, and all were Caucasian by self-report. HSV detection rate and lesion frequency were compared by genotype using Poisson regression. Overall, HSV was detected on 19.1% of days and lesions on 11.6% of days. The presence of HLA-A*01 was directly associated with HSV detection frequency, whereas the presence of HLA-C*12 was inversely associated with HSV detection frequency. The presence of HLA-A*01 was directly associated with lesion rate, while HLA-A*26, -C*01 and -DQB1*0106 were associated with decreased lesions. We observed an interaction between the absence of both 2DS4del and HLA-Bw4 and higher lesion rate. Heterozygosity of HLA was also associated with reduced lesion frequency. Immune control of genital HSV infection relies on multiple interacting immunogenetic elements, including epistatic interactions between HLA and KIR.

Indexed as

Genes, MHC Class IGenes, MHC Class IIVirus SheddingAdultAgedCohort StudiesFemaleGenotypeHerpes GenitalisHerpesvirus 2, HumanHeterozygoteHumansLinkage DisequilibriumMaleMiddle AgedProspective StudiesReceptors, KIR

Identifiers

PMID27853144
PMCPMC5133162
OpenAlexW2550334145

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.