Evidence map›Paper›PMID 27853135›Full record

ArticleNature communications2016

Cl-out is a novel cooperative optogenetic tool for extruding chloride from neurons.

Hannah Alfonsa, Jeremy H Lakey, Robert N Lightowlers, Andrew J Trevelyan

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Optogenetic Determination of Dynamic and Cell-Type-Specific Inhibitory Reversal Potentials.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
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  6. Inhibition of Dopamine Neurons Prevents Incentive Value Encoding of a Reward Cue: With Revelations from Deep Phenotyping.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Indirect Effects of Halorhodopsin Activation: Potassium Redistribution, Nonspecific Inhibition, and Spreading Depolarization.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  11. Review
  12. Article
  13. Potentiating KCC2 activity is sufficient to limit the onset and severity of seizures.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
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  15. Review
  16. Review
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hannah AlfonsaInstitute of Neuroscience, Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.
Jeremy H LakeyInstitute for Cell and Molecular Biosciences, Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.
Robert N LightowlersInstitute for Cell and Molecular Biosciences, Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.
Andrew J TrevelyanInstitute of Neuroscience, Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.
The Neurosciences Foundation · GB

Funding

Medical Research Council MR/J013250/1
6 · The paper itself

Abstract

Chloride regulation affects brain function in many ways, for instance, by dictating the GABAergic reversal potential, and thereby influencing neuronal excitability and spike timing. Consistent with this, there is increasing evidence implicating chloride in a range of neurological conditions. Investigations about these conditions, though, are made difficult by the limited range of tools available to manipulate chloride levels. In particular, there has been no way to actively remove chloride from neurons; we now describe an optogenetic strategy, 'Cl-out', to do exactly this. Cl-out achieves its effect by the cooperative action of two different component opsins: the proton pump, Archaerhodopsin and a chloride channel opsin. The removal of chloride happens when both are activated together, using Archaerhodopsin as an optical voltage clamp to provide the driving force for chloride removal through the concurrently opened, chloride channels. We further show that this novel optogenetic strategy can reverse an in vitro epileptogenic phenotype.

Indexed as

AnimalsChloride ChannelsChloridesEmbryo, MammalianFemaleGramicidinMaleMembrane PotentialsNeuronsOptogeneticsPatch-Clamp TechniquesRatsChloride ChannelsChloridesGramicidin

Identifiers

PMID27853135
PMCPMC5118542
OpenAlexW2549969211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.