Evidence map›Paper›PMID 27852845›Full record

ArticleJournal of virology2017

Honey Bee Deformed Wing Virus Structures Reveal that Conformational Changes Accompany Genome Release.

Lindsey J Organtini, Kristin L Shingler, Robert E Ashley, Elizabeth A Capaldi, Kulsoom Durrani, Kelly A Dryden, Alexander M Makhov, James F Conway, Marie C Pizzorno, Susan Hafenstein

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. DWV InfectionFrontiers in microbiology · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Virion structure and genome delivery mechanism of sacbrood honeybee virus.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Lindsey J OrgantiniPennsylvania State University College of Medicine, Hershey, Pennsylvania, USA.
Kristin L ShinglerPennsylvania State University College of Medicine, Hershey, Pennsylvania, USA.
Robert E AshleyPennsylvania State University College of Medicine, Hershey, Pennsylvania, USA.
Elizabeth A CapaldiBucknell University, Lewisburg, Pennsylvania, USA.
Kulsoom DurraniPennsylvania State University College of Medicine, Hershey, Pennsylvania, USA.
Kelly A DrydenUniversity of Virginia, Charlottesville, Virginia, USA.
Alexander M MakhovUniversity of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
James F ConwayUniversity of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Marie C PizzornoBucknell University, Lewisburg, Pennsylvania, USA.
Susan HafensteinPennsylvania State University College of Medicine, Hershey, Pennsylvania, USA shafenstein@hmc.psu.edu.
Pennsylvania State University · USBucknell University · USUniversity of Pittsburgh · USUniversity of Virginia · US

Funding

VIRUSES AND CANCERT32CA060395 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MEYERS, CRAIG M · 1994 to 2021
$4.3M
Mechanisms of Enterovirus EntryR01AI107121 · NIAID · UNIVERSITY OF MINNESOTA · PI HAFENSTEIN, SUSAN · 2015 to 2024
$3.9M
300 keV Liquid Helium Robotic MicroscopeS10RR025067 · NCRR · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H. · 2009 to 2009
$2.0M
Acquisition of a Cryo-Electron MicroscopeS10OD011986 · OD · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HAFENSTEIN, SUSAN · 2012 to 2012
$600k
Direct electron detecting (DED) cameraS10OD019995 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CONWAY, JAMES F. · 2015 to 2015
$548k
Direct Electron Detector for a Titan Krios Robotic Electron Cryo-MicroscopeS10OD018149 · OD · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H., YEAGER, MARK JAY · 2014 to 2014
$500k
NCI NIH HHS T32 CA060395NCRR NIH HHS S10 RR025067NIAID NIH HHS R01 AI107121NIH HHS S10 OD011986NIH HHS S10 OD018149NIH HHS S10 OD019995
6 · The paper itself

Abstract

The picornavirus-like deformed wing virus (DWV) has been directly linked to colony collapse; however, little is known about the mechanisms of host attachment or entry for DWV or its molecular and structural details. Here we report the three-dimensional (3-D) structures of DWV capsids isolated from infected honey bees, including the immature procapsid, the genome-filled virion, the putative entry intermediate (A-particle), and the empty capsid that remains after genome release. The capsids are decorated by large spikes around the 5-fold vertices. The 5-fold spikes had an open flower-like conformation for the procapsid and genome-filled capsids, whereas the putative A-particle and empty capsids that had released the genome had a closed tube-like spike conformation. Between the two conformations, the spikes undergo a significant hinge-like movement that we predicted using a Robetta model of the structure comprising the spike. We conclude that the spike structures likely serve a function during host entry, changing conformation to release the genome, and that the genome may escape from a 5-fold vertex to initiate infection. Finally, the structures illustrate that, similarly to picornaviruses, DWV forms alternate particle conformations implicated in assembly, host attachment, and RNA release. IMPORTANCE: Honey bees are critical for global agriculture, but dramatic losses of entire hives have been reported in numerous countries since 2006. Deformed wing virus (DWV) and infestation with the ectoparasitic mite Varroa destructor have been linked to colony collapse disorder. DWV was purified from infected adult worker bees to pursue biochemical and structural studies that allowed the first glimpse into the conformational changes that may be required during transmission and genome release for DWV.

Indexed as

Amino Acid SequenceAnimalsBeesCapsidInsect VirusesModels, MolecularPicornaviridaeProtein ConformationViral ProteinsVirionViral Proteins5-fold spikes80Sconformation changedeformed wing virusDWVhoney beeinsectlife cyclepicornavirusprocapsid

Identifiers

PMID27852845
PMCPMC5215330
OpenAlexW2554712729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.