Evidence map›Paper›PMID 27845898›Full record

ArticleOncotarget2016

Transcription factor LSF-DNMT1 complex dissociation by FQI1 leads to aberrant DNA methylation and gene expression.

Hang Gyeong Chin, V K Chaithanya Ponnaluri, Guoqiang Zhang, Pierre-Olivier Estève, Scott E Schaus, Ulla Hansen, Sriharsa Pradhan

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. DNMT Enzymes and Their Impact on Cervical Cancer: A State-of-the-Art Review.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hang Gyeong ChinNew England Biolabs, Inc. Ipswich, MA 01938, USA.
V K Chaithanya PonnaluriNew England Biolabs, Inc. Ipswich, MA 01938, USA.
Guoqiang ZhangNew England Biolabs, Inc. Ipswich, MA 01938, USA.
Pierre-Olivier EstèveNew England Biolabs, Inc. Ipswich, MA 01938, USA.
Scott E SchausDeptartment of Chemistry, Center for Molecular Discovery, Boston University, Boston, MA 02215, USA.
Ulla HansenMCBB Graduate Program, Boston University, Boston, MA 02215, USA.
Sriharsa PradhanNew England Biolabs, Inc. Ipswich, MA 01938, USA.
New England Biolabs (United States) · USBoston University · US

Funding

SYNTHESIS OF LIBRARIES--LINEAR/POLYKETIDE/POLYPROPIONATEP50GM067041 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI PORCO, JOHN A. · 2002 to 2012
$23.7M
Center for Molecular Discovery (CMD): A Small Molecule Resource for Biomedical ResearchR24GM111625 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI PORCO, JOHN A. · 2015 to 2017
$1.5M
NIGMS NIH HHS P50 GM067041NIGMS NIH HHS R24 GM111625
6 · The paper itself

Abstract

The transcription factor LSF is highly expressed in hepatocellular carcinoma (HCC) and promotes oncogenesis. Factor quinolinone inhibitor 1 (FQI1), inhibits LSF DNA-binding activity and exerts anti-proliferative activity. Here, we show that LSF binds directly to the maintenance DNA (cytosine-5) methyltransferase 1 (DNMT1) and its accessory protein UHRF1 both in vivo and in vitro. Binding of LSF to DNMT1 stimulated DNMT1 activity and FQI1 negated the methyltransferase activation. Addition of FQI1 to the cell culture disrupted LSF bound DNMT1 and UHRF1 complexes, resulting in global aberrant CpG methylation. Differentially methylated regions (DMR) containing at least 3 CpGs, were significantly altered by FQI1 compared to control cells. The DMRs were mostly concentrated in CpG islands, proximal to transcription start sites, and in introns and known genes. These DMRs represented both hypo and hypermethylation, correlating with altered gene expression. FQI1 treatment elicits a cascade of effects promoting altered cell cycle progression. These findings demonstrate a novel mechanism of FQI1 mediated alteration of the epigenome by DNMT1-LSF complex disruption, leading to aberrant DNA methylation and gene expression.

Indexed as

AnimalsAntineoplastic AgentsBenzodioxolesCarcinoma, HepatocellularCCAAT-Enhancer-Binding ProteinsCell CycleCell ProliferationChlorocebus aethiopsCOS CellsCpG IslandsDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA MethylationEpigenesis, GeneticGene Expression Regulation, NeoplasticHEK293 Cells8-(2-ethoxyphenyl)-7,8-dihydro-(1,3)dioxolo(4,5-g)quinolin-6(5H)-oneAntineoplastic AgentsBenzodioxolesCCAAT-Enhancer-Binding ProteinsDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNMT1 protein, humanQuinolonesTFCP2 protein, humanTranscription FactorsUbiquitin-Protein LigasesUHRF1 protein, humanDNA methylationgene expressionHCCtranscription factor LSF

Identifiers

PMID27845898
PMCPMC5347793
OpenAlexW2553910972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.