Evidence map›Paper›PMID 27845382›Full record

ArticleScientific reports2016

Effect of bio-engineering on size, shape, composition and rigidity of bacterial microcompartments.

Matthias J Mayer, Rokas Juodeikis, Ian R Brown, Stefanie Frank, David J Palmer, Evelyne Deery, David M Beal, Wei-Feng Xue, Martin J Warren

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Engineering spatiotemporal organization and dynamics in synthetic cells.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Matthias J MayerIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Rokas JuodeikisIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Ian R BrownIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Stefanie FrankDepartment of Biochemical Engineering, University College London, Bernard Katz Building, Gordon Street, London WC1E 6BT, UK.
David J PalmerIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Evelyne DeeryIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
David M BealIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Wei-Feng XueIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.
Martin J WarrenIndustrial Biotechnology Centre and School of Biosciences, University of Kent, Giles Lane, Canterbury, Kent CT2 7NJ, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/H013180/1Biotechnology and Biological Sciences Research Council BB/M002969/1
6 · The paper itself

Abstract

Bacterial microcompartments (BMCs) are proteinaceous organelles that are found in a broad range of bacteria and are composed of an outer shell that encases an enzyme cargo representing a specific metabolic process. The outer shell is made from a number of different proteins that form hexameric and pentameric tiles, which interact to allow the formation of a polyhedral edifice. We have previously shown that the Citrobacter freundii BMC associated with 1,2-propanediol utilization can be transferred into Escherichia coli to generate a recombinant BMC and that empty BMCs can be formed from just the shell proteins alone. Herein, a detailed structural and proteomic characterization of the wild type BMC is compared to the recombinant BMC and a number of empty BMC variants by 2D-gel electrophoresis, mass spectrometry, transmission electron microscopy (TEM) and atomic force microscopy (AFM). Specifically, it is shown that the wild type BMC and the recombinant BMC are similar in terms of composition, size, shape and mechanical properties, whereas the empty BMC variants are shown to be smaller, hollow and less malleable.

Indexed as

Bacterial ProteinsBioengineeringCitrobacter freundiiOrganellesPropylene GlycolProteomicsBacterial ProteinsPropylene Glycol

Identifiers

PMID27845382
PMCPMC5109269

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.