Evidence map›Paper›PMID 27844144›Full record

ArticleHuman genetics2017

Identification and functional characterisation of genetic variants in OLFM2 in children with developmental eye disorders.

R Holt, S A Ugur Iseri, A W Wyatt, D A Bax, D Gold Diaz, C Santos, S Broadgate, R Dunn, J Bruty, Y Wallis and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Matricellular proteins in cutaneous wound healing.Frontiers in cell and developmental biology · 2022
    Review
  3. Coinheritance ofWorld journal of clinical cases · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 3 countries.

R HoltFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK.
S A Ugur IseriDepartment of Genetics, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, Turkey.
A W WyattDepartment of Urologic Sciences, University of British Columbia, Vancouver, Canada.
D A BaxFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK.
D Gold DiazDevelopmental Biology & Cancer Programme, UCL Great Ormond Street Institute of Child Health, London, UK.
C SantosDevelopmental Biology & Cancer Programme, UCL Great Ormond Street Institute of Child Health, London, UK.
S BroadgateFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK.
R DunnDepartment of Genetics, Viapath, Guy's Hospital, London, UK.
J BrutyWest Midlands Regional Genetics Laboratory, Birmingham Women's Hospital, Birmingham, UK.
Y WallisWest Midlands Regional Genetics Laboratory, Birmingham Women's Hospital, Birmingham, UK.
D McMullanWest Midlands Regional Genetics Laboratory, Birmingham Women's Hospital, Birmingham, UK.
C OgilvieDepartment of Cytogenetics, Guy's and St Thomas' NHS Foundation Trust, London, UK.
D GerrelliDevelopmental Biology & Cancer Programme, UCL Great Ormond Street Institute of Child Health, London, UK.
Y ZhangFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK.
Nicola RaggeFaculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK. nragge@brookes.ac.uk.
Birmingham Women's Hospital · GBOxford Brookes University · GBUniversity College London · GBGreat Ormond Street Hospital · GBGuy's and St Thomas' NHS Foundation Trust · GBGuy's Hospital · GBIstanbul University · TRUniversity of British Columbia · CA

Funding

Medical Research Council G0700089Medical Research Council MC_PC_15004Wellcome Trust 099175/Z/12/Z
6 · The paper itself

Abstract

Anophthalmia, microphthalmia, and coloboma are a genetically heterogeneous spectrum of developmental eye disorders and affect around 30 per 100,000 live births. OLFM2 encodes a secreted glycoprotein belonging to the noelin family of olfactomedin domain-containing proteins that modulate the timing of neuronal differentiation during development. OLFM2 SNPs have been associated with open angle glaucoma in a case-control study, and knockdown of Olfm2 in zebrafish results in reduced eye size. From a cohort of 258 individuals with developmental eye anomalies, we identified two with heterozygous variants in OLFM2: an individual with bilateral microphthalmia carrying a de novo 19p13.2 microdeletion involving OLFM2 and a second individual with unilateral microphthalmia and contralateral coloboma who had a novel single base change in the 5' untranslated region. Dual luciferase assays demonstrated that the latter variant causes a significant decrease in expression of OLFM2. Furthermore, RNA in situ hybridisation experiments using human developmental tissue revealed expression in relevant structures, including the lens vesicle and optic cup. Our study indicates that OLFM2 is likely to be important in mammalian eye development and disease and should be considered as a gene for human ocular anomalies.

Indexed as

Polymorphism, Single NucleotideCell Line, TumorCohort StudiesExtracellular Matrix ProteinsEyeEye AbnormalitiesEye ProteinsGene DeletionGene Expression RegulationGlaucoma, Open-AngleGlycoproteinsHigh-Throughput Nucleotide SequencingHumansInfantMaleExtracellular Matrix ProteinsEye ProteinsGlycoproteinsolfactomedinOLFM2 protein, human

Identifiers

PMID27844144
OpenAlexW2553880444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.