Evidence map›Paper›PMID 27841867›Full record

ArticleOncogene2017

Rho-associated kinase 1 inhibition is synthetically lethal with von Hippel-Lindau deficiency in clear cell renal cell carcinoma.

J M Thompson, Q H Nguyen, M Singh, M W Pavesic, I Nesterenko, L J Nelson, A C Liao, O V Razorenova

Open access · bronzeAbstract read
In one paragraph

Article in Oncogene, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  14. Gut Microbiome Critically Impacts PCB-induced Changes in Metabolic Fingerprints and the Hepatic Transcriptome in Mice.Toxicological sciences : an official journal of the Society of Toxicology · 2020
    Article
  15. The mProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Article
  17. Review
  18. Article
  19. Rho kinase inhibitors reduce voltage-dependent CaAmerican journal of physiology. Renal physiology · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

J M ThompsonDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
Q H NguyenDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
M SinghDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
M W PavesicDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
I NesterenkoDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
L J NelsonDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
A C LiaoDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
O V RazorenovaDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA.
University of California, Irvine · US

Funding

University of California Health Participation in the National COVID Cohort Collaborative (N3C)UL1TR001414 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M, VILAIN, ERIC J. · 2015 to 2023
$35.1M
CARCINOGENESIST32CA009054 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L, FRUMAN, DAVID ALEXANDER · 1985 to 2025
$8.6M
NRSA Training CoreTL1TR001415 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CAIOZZO, VINCENT JAMES, HEAD, ELIZABETH · 2015 to 2023
$4.2M
Training Program in Stem Cell Translational Medicine for Neurological DisordersT32NS082174 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI PETER John DONOVAN, Leslie Michels Thompson · 2013 to 2026
$3.3M
Synthetic lethality in VHL tumor suppressor null tumorsR03CA202563 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RAZORENOVA, OLGA V · 2016 to 2017
$142k
NCATS NIH HHS TL1 TR001415NCATS NIH HHS UL1 TR001414NCI NIH HHS R03 CA202563NCI NIH HHS T32 CA009054NINDS NIH HHS T32 NS082174
6 · The paper itself

Abstract

Clear cell renal cell carcinoma (CC-RCC) is the most lethal of all genitourinary cancers. The functional loss of the von Hippel-Lindau (VHL) gene occurs in 90% of CC-RCC, driving cancer progression. The objective of this study was to identify chemical compounds that are synthetically lethal with VHL deficiency in CC-RCC. An annotated chemical library, the library of pharmacologically active compounds (LOPAC), was screened in parallel on VHL-deficient RCC4 cells and RCC4VHL cells with re-introduced VHL. The ROCK inhibitor, Y-27632, was identified and validated for selective targeting of VHL-deficient CC-RCC in multiple genetic backgrounds by clonogenic assays. Downregulation of ROCK1 by small interfering RNA (siRNA) selectively reduced the colony-forming ability of VHL-deficient CC-RCC, thus mimicking the effect of Y-27632 treatment, whereas downregulation of ROCK2 had no effect. In addition, two other ROCK inhibitors, RKI 1447 and GSK 429286, selectively targeted VHL-deficient CC-RCC. CC-RCC treatment with ROCK inhibitors is cytotoxic and cytostatic based on bromodeoxyuridine (BrdU) assay, propidium iodide (PI) staining and growth curves, and blocks cell migration based on transwell assay. On the one hand, knockdown of hypoxia-inducible factor (HIF) β in the VHL-deficient CC-RCC had a protective effect against Y-27632 treatment, mimicking VHL reintroduction. On the other hand, CC-RCCVHL cells were sensitized to Y-27632 treatment in hypoxia (2% O

Indexed as

AmidesAnimalsApoptosisBiomarkers, TumorCarcinoma, Renal CellCell CycleCell ProliferationEnzyme InhibitorsGene Expression Regulation, NeoplasticHumansHypoxia-Inducible Factor 1, alpha SubunitKidney NeoplasmsMicePyridinesrho-Associated KinasesRNA, Small InterferingAmidesBiomarkers, TumorEnzyme InhibitorsHypoxia-Inducible Factor 1, alpha SubunitPyridinesrho-Associated KinasesRNA, Small InterferingROCK1 protein, humanVon Hippel-Lindau Tumor Suppressor ProteinY 27632

Identifiers

PMID27841867
PMCPMC5323317
OpenAlexW2555040012

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.