Evidence map›Paper›PMID 27841854›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2017

Protective effects of an HTRA1 insertion-deletion variant against age-related macular degeneration in the Chinese populations.

Tsz Kin Ng, Xiao Ying Liang, Fang Lu, David Tl Liu, Gary Hf Yam, Li Ma, Pancy Os Tam, Haoyu Chen, Ling Ping Cen, Li Jia Chen and 2 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Inappropriate interpretation of non-pathogenic HTRA1 variant as pathogenic.Annals of clinical and translational neurology · 2023
    Article
  3. Involvement of Anoikis in Dissociated Optic Nerve Fiber Layer Appearance.International journal of molecular sciences · 2021
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Tsz Kin NgDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.ORCID 0000-0001-7863-7229
Xiao Ying LiangDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Fang LuThe Sichuan Key Laboratory for Human Disease Gene Study, Chengdu, China.
David Tl LiuDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Gary Hf YamDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Li MaDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Pancy Os TamDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Haoyu ChenThe Joint Shantou International Eye Center of Shantou University and The Chinese University of Hong Kong, Shantou, China.ORCID 0000-0003-0676-4610
Ling Ping CenThe Joint Shantou International Eye Center of Shantou University and The Chinese University of Hong Kong, Shantou, China.
Li Jia ChenDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Zhenglin YangThe Sichuan Key Laboratory for Human Disease Gene Study, Chengdu, China.
Chi Pui PangDepartment of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Kowloon, Hong Kong.
Chinese University of Hong Kong · HKSichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age-related macular degeneration (AMD) is a leading cause of visual impairment and irreversible blindness in most developed countries, affecting about 50 million elderly people worldwide. Retinal pigment epithelial (RPE) cell degeneration is the pathophysiological cause of AMD, leading to geographic atrophy and choroidal neovascularization. We and others have previously identified several polymorphisms on chromosome 10q26 (HTRA1 rs11200638 as well as LOC387715 rs10490924 and c.372_815del443ins54) associated with AMD. In this study, we confirmed the association of our previously identified HTRA1 insertion-deletion (indel) variant (c.34delCinsTCCT) in 195 exudative AMD patients and 390 controls from the Hong Kong Chinese cohort with additional 168 patients and 210 controls from the Chengdu Chinese cohort and followed by studying its biological functions in RPE cells. Genetic analysis verified the higher prevalence of c.34delCinsTCCT allele in control subjects (8.0%) than in AMD patients (1.9%; P=7.87 × 10

Indexed as

INDEL MutationAgedAged, 80 and overAllelesAsian PeopleBase SequenceCell LineCells, CulturedChinaFemaleGene ExpressionGene FrequencyGenetic Predisposition to DiseaseGenotypeHaplotypesHigh-Temperature Requirement A Serine Peptidase 1High-Temperature Requirement A Serine Peptidase 1HTRA1 protein, humanSerine Endopeptidases

Identifiers

PMID27841854
OpenAlexW2556315594

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.