Evidence map›Paper›PMID 27841324›Full record

ArticleScientific reports2016

5-azacytidine affects TET2 and histone transcription and reshapes morphology of human skin fibroblasts.

Elena F M Manzoni, Georgia Pennarossa, Magda deEguileor, Gianluca Tettamanti, Fulvio Gandolfi, Tiziana A L Brevini

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

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  15. Current Advances in 3D Tissue and Organ Reconstruction.International journal of molecular sciences · 2021
    Review
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  20. Adding a dimension to cell fate.Animal reproduction · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Elena F M ManzoniLaboratory of Biomedical Embryology, Centre for Stem Cell Research; Università degli Studi di Milano, Milan, 20133, Italy.
Georgia PennarossaLaboratory of Biomedical Embryology, Centre for Stem Cell Research; Università degli Studi di Milano, Milan, 20133, Italy.
Magda deEguileorDepartment of Biotechnology and Life Sciences; Università degli Studi dell'Insubria, Varese, 21100, Italy.
Gianluca TettamantiDepartment of Biotechnology and Life Sciences; Università degli Studi dell'Insubria, Varese, 21100, Italy.
Fulvio GandolfiLaboratory of Biomedical Embryology, Centre for Stem Cell Research; Università degli Studi di Milano, Milan, 20133, Italy.
Tiziana A L BreviniLaboratory of Biomedical Embryology, Centre for Stem Cell Research; Università degli Studi di Milano, Milan, 20133, Italy.
University of Milan · ITUniversity of Insubria · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotype definition is controlled by epigenetic regulations that allow cells to acquire their differentiated state. The process is reversible and attractive for therapeutic intervention and for the reactivation of hypermethylated pluripotency genes that facilitate transition to a higher plasticity state. We report the results obtained in human fibroblasts exposed to the epigenetic modifier 5-azacytidine (5-aza-CR), which increases adult cell plasticity and facilitates phenotype change. Although many aspects controlling its demethylating action have been widely investigated, the mechanisms underlying 5-aza-CR effects on cell plasticity are still poorly understood. Our experiments confirm decreased global methylation, but also demonstrate an increase of both Formylcytosine (5fC) and 5-Carboxylcytosine (5caC), indicating 5-aza-CR ability to activate a direct and active demethylating effect, possibly mediated via TET2 protein increased transcription. This was accompanied by transient upregulation of pluripotency markers and incremented histone expression, paralleled by changes in histone acetylating enzymes. Furthermore, adult fibroblasts reshaped into undifferentiated progenitor-like phenotype, with a sparse and open chromatin structure. Our findings indicate that 5-aza-CR induced somatic cell transition to a higher plasticity state is activated by multiple regulations that accompany the demethylating effect exerted by the modifier.

Indexed as

AdultAzacitidineCells, CulturedChromatinDioxygenasesDNA-Binding ProteinsDNA MethylationDown-RegulationEpigenesis, GeneticFibroblastsHistone AcetyltransferasesHistone Deacetylase 1HistonesHumansMicroscopy, ElectronMiddle AgedAzacitidineChromatinDioxygenasesDNA-Binding ProteinsHDAC1 protein, humanHistone Acetyltransferaseshistone acetyltransferase type B complexHistone Deacetylase 1HistonesProto-Oncogene ProteinsRNA, Small InterferingTET2 protein, humanTranscription Factors

Identifiers

PMID27841324
PMCPMC5107985
OpenAlexW2555691655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.