Evidence map›Paper›PMID 27840045›Full record

ArticleStem cell reports2016

CGG Repeat-Induced FMR1 Silencing Depends on the Expansion Size in Human iPSCs and Neurons Carrying Unmethylated Full Mutations.

Urszula Brykczynska, Eline Pecho-Vrieseling, Anke Thiemeyer, Jessica Klein, Isabelle Fruh, Thierry Doll, Carole Manneville, Sascha Fuchs, Mariavittoria Iazeolla, Martin Beibel and 13 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. mSphere · 2026
    Article
  2. NAR molecular medicine · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. DNA Methylation, Mechanisms ofBiomolecules · 2021
    Review
  11. Length Polymorphism and Methylation Status of UPS29 Minisatellite of theInternational journal of molecular sciences · 2020
    Article
  12. Review
  13. CGG Repeat Expansion, and ElevatedFrontiers in cell and developmental biology · 2020
    Article
  14. Article
  15. Review
  16. Targeted Reactivation ofFrontiers in molecular neuroscience · 2018
    Article
  17. Reevaluation ofFrontiers in molecular neuroscience · 2018
    Review
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 4 institutions in 2 countries.

Urszula BrykczynskaNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Eline Pecho-VrieselingNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Anke ThiemeyerNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Jessica KleinNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Isabelle FruhNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Thierry DollNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Carole MannevilleNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Sascha FuchsNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Mariavittoria IazeollaNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Martin BeibelNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Guglielmo RomaNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Ulrike NaumannNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Nicholas KelleyNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Edward J OakeleyNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Matthias MuellerNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Baltazar Gomez-MancillaNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Marc BühlerFriedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland.
Elisabetta TabolacciInstitute of Genomic Medicine, Catholic University, 00168 Rome, Italy.
Pietro ChiurazziInstitute of Genomic Medicine, Catholic University, 00168 Rome, Italy.
Giovanni NeriInstitute of Genomic Medicine, Catholic University, 00168 Rome, Italy.
Tewis BouwmeesterNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland.
Francesco Paolo Di GiorgioNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland. Electronic address: francesco.di_giorgio@novartis.com.
Barna D FodorNovartis Institutes for Biomedical Research, 4056 Basel, Switzerland. Electronic address: barna.fodor@novartis.com.
Novartis Institutes for BioMedical ResearchNovartis (Switzerland) · CHCenter for Genomic Science · ITFriedrich Miescher Institute · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In fragile X syndrome (FXS), CGG repeat expansion greater than 200 triplets is believed to trigger FMR1 gene silencing and disease etiology. However, FXS siblings have been identified with more than 200 CGGs, termed unmethylated full mutation (UFM) carriers, without gene silencing and disease symptoms. Here, we show that hypomethylation of the FMR1 promoter is maintained in induced pluripotent stem cells (iPSCs) derived from two UFM individuals. However, a subset of iPSC clones with large CGG expansions carries silenced FMR1. Furthermore, we demonstrate de novo silencing upon expansion of the CGG repeat size. FMR1 does not undergo silencing during neuronal differentiation of UFM iPSCs, and expression of large unmethylated CGG repeats has phenotypic consequences resulting in neurodegenerative features. Our data suggest that UFM individuals do not lack the cell-intrinsic ability to silence FMR1 and that inter-individual variability in the CGG repeat size required for silencing exists in the FXS population.

Indexed as

Gene SilencingCell DifferentiationClone CellsDNA MethylationEpigenesis, GeneticFemaleFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeGenetic LociHumansInduced Pluripotent Stem CellsMaleMutationNeuronsPedigreeTrinucleotide Repeat ExpansionFragile X Messenger Ribonucleoprotein 1CGG repeatde novo silencingDNA methylationFMR1fragile X syndromefragile X tremor ataxia syndromeneurontriplet expansionubiquitin inclusionunmethylated full mutation

Identifiers

PMID27840045
PMCPMC5161530
OpenAlexW2549151030

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.