Evidence map›Paper›PMID 27838394›Full record

ArticleBiochimica et biophysica acta. General subjects2017

Opioid precursor protein isoform is targeted to the cell nuclei in the human brain.

Olga Kononenko, Igor Bazov, Hiroyuki Watanabe, Ganna Gerashchenko, Oleg Dyachok, Dineke S Verbeek, Kanar Alkass, Henrik Druid, Malin Andersson, Jan Mulder and 6 more

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. General subjects, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 5 countries.

Olga KononenkoDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden; State Key Lab for Molecular Biology, Bogomoletz Institute of Physiology, Kiev 01024, Ukraine.
Igor BazovDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden. Electronic address: Igor.Bazov@farmbio.uu.se.
Hiroyuki WatanabeDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden.
Ganna GerashchenkoDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden; Department of Functional Genomics, Institute Molecular Biology, Kiev 03680, Ukraine.
Oleg DyachokDepartment of Medical Cell Biology, Uppsala University, 751 23, Sweden.
Dineke S VerbeekDepartment of Genetics, University Medical Center Groningen, University of Groningen, Groningen 30001, Netherlands.
Kanar AlkassDepartment of Forensic Medicine, Karolinska Institute, Stockholm 171 77, Sweden.
Henrik DruidDepartment of Forensic Medicine, Karolinska Institute, Stockholm 171 77, Sweden.
Malin AnderssonDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden.
Jan MulderDepartment of Neuroscience, Science for Life Laboratory, Karolinska Institute, Stockholm 171 77, Sweden.
Åsa Fex SvenningsenInstitute of Molecular Medicine-Neurobiology Research, University of Southern Denmark, Odense 5000, Denmark.
Grazyna RajkowskaDepartment of Psychiatry and Human Behavior, University of Mississippi Medical Center, Jackson 2500, USA.
Craig A StockmeierDepartment of Psychiatry and Human Behavior, University of Mississippi Medical Center, Jackson 2500, USA.
Oleg KrishtalState Key Lab for Molecular Biology, Bogomoletz Institute of Physiology, Kiev 01024, Ukraine.
Tatiana YakovlevaDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden.
Georgy BakalkinDepartment of Pharmaceutical Biosciences, Uppsala University, Uppsala 751 24, Sweden.
Uppsala University · SEKarolinska Institutet · SEBogomoletz Institute of Physiology · UAInstitute of Molecular Biology and Genetics · UAJackson Memorial Hospital · USScience for Life Laboratory · SEUniversity Medical Center Groningen · NLUniversity of Mississippi Medical Center · USUniversity of Southern Denmark · DK

Funding

Brain Tissue Resource Centre for Alcohol ResearchR28AA012725 · NIAAA · UNIVERSITY OF SYDNEY · PI Greg Trevor Sutherland · 2012 to 2026
$7.0M
Center for Psychiatric NeuroscienceP30GM103328 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI STOCKMEIER, CRAIG ALLEN · 2013 to 2017
$5.5M
NIAAA NIH HHS R28 AA012725NIGMS NIH HHS P30 GM103328
6 · The paper itself

Abstract

backgroundNeuropeptide precursors are traditionally viewed as proteins giving rise to small neuropeptide molecules. Prodynorphin (PDYN) is the precursor protein to dynorphins, endogenous ligands for the κ-opioid receptor. Alternative mRNA splicing of neuropeptide genes may regulate cell- and tissue-specific neuropeptide expression and produce novel protein isoforms. We here searched for novel PDYN mRNA and their protein product in the human brain.

methodsNovel PDYN transcripts were identified using nested PCR amplification of oligo(dT) selected full-length capped mRNA. Gene expression was analyzed by qRT-PCR, PDYN protein by western blotting and confocal imaging, dynorphin peptides by radioimmunoassay. Neuronal nuclei were isolated using fluorescence-activated nuclei sorting (FANS) from postmortem human striatal tissue. Immunofluorescence staining and confocal microscopy was performed for human caudate nucleus.

resultsTwo novel human PDYN mRNA splicing variants were identified. Expression of one of them was confined to the striatum where its levels constituted up to 30% of total PDYN mRNA. This transcript may be translated into ∆SP-PDYN protein lacking 13 N-terminal amino acids, a fragment of signal peptide (SP). ∆SP-PDYN was not processed to mature dynorphins and surprisingly, was targeted to the cell nuclei in a model cellular system. The endogenous PDYN protein was identified in the cell nuclei in human striatum by western blotting of isolated neuronal nuclei, and by confocal imaging. CONCLUSIONS AND GENERAL SIGNIFICANCE: High levels of alternatively spliced ∆SP-PDYN mRNA and nuclear localization of PDYN protein suggests a nuclear function for this isoform of the opioid peptide precursor in human striatum.

Indexed as

AdultAgedAged, 80 and overAmino AcidsAnimalsCaudate NucleusCell Line, TumorCell NucleusDynorphinsEnkephalinsFemaleGene Expression RegulationGene SilencingHumansMaleMiddle AgedAmino AcidsDynorphinsEnkephalinsOpioid PeptidespreproenkephalinProtein IsoformsProtein PrecursorsRNA, MessengerAlternative splicingHuman brainNeuropeptide precursor proteinNuclear localizationProdynorphin

Identifiers

PMID27838394
PMCPMC5323248
OpenAlexW2548803637

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.