Evidence map›Paper›PMID 27837488›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2017

Subcellular Localization of Pseudomonas syringae pv. tomato Effector Proteins in Plants.

Kyaw Aung, Xiufang Xin, Christy Mecey, Sheng Yang He

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. The NEL Family of Bacterial E3 Ubiquitin Ligases.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Nuclear Localization of HopA1Plants (Basel, Switzerland) · 2021
    Article
  9. Article
  10. Identification and Functional Analysis of AopN, anInternational journal of molecular sciences · 2020
    Article
  11. Article
  12. Article
  13. Spatiotemporal Monitoring ofThe Plant cell · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kyaw AungDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
Xiufang XinDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
Christy MeceyDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
Sheng Yang HeDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA. hes@msu.edu.
Michigan State University · US

Funding

Innate immunity-associated recycling endosome in Arabidopsis and pathogen attackR01GM109928 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HE, SHENG YANG · 2015 to 2018
$1.1M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM109928
6 · The paper itself

Abstract

Animal and plant pathogenic bacteria use type III secretion systems to translocate proteinaceous effectors to subvert innate immunity of their host organisms. Type III secretion/effector systems are a crucial pathogenicity factor in many bacterial pathogens of plants and animals. Pseudomonas syringae pv. tomato (Pst) DC3000 injects a total of 36 protein effectors that target a variety of host proteins. Studies of a subset of Pst DC3000 effectors demonstrated that bacterial effectors, once inside the host cell, are localized to different subcellular compartments, including plasma membrane, cytoplasm, mitochondria, chloroplast, and Trans-Golgi network, to carry out their virulence functions. Identifying the subcellular localization of bacterial effector proteins in host cells could provide substantial clues to understanding the molecular and cellular basis of the virulence activities of effector proteins. In this chapter, we present methods for transient or stable expression of bacterial effector proteins in tobacco and/or Arabidopsis thaliana for live cell imaging as well as confirming the subcellular localization in plants using fluorescent organelle markers or chemical treatment.

Indexed as

Bacterial ProteinsGene ExpressionGenes, ReporterHost-Pathogen InteractionsIntracellular SpaceMicroscopy, ConfocalNicotianaPlant DiseasesPlants, Genetically ModifiedProtein TransportPseudomonas syringaeSolanum lycopersicumTransformation, GeneticType III Secretion SystemsBacterial ProteinsType III Secretion SystemsAgrobacteriumArabidopsis thalianaBacterial pathogenesisConfocal microscopyPlant immunityPlant pathogenTobaccoType III secretion

Identifiers

PMID27837488
PMCPMC5643156
OpenAlexW2555253409

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.