Evidence map›Paper›PMID 27837085›Full record

ArticlePlant physiology2017

KNS4/UPEX1: A Type II Arabinogalactan β-(1,3)-Galactosyltransferase Required for Pollen Exine Development.

Toshiya Suzuki, Joan Oñate Narciso, Wei Zeng, Allison van de Meene, Masayuki Yasutomi, Shunsuke Takemura, Edwin R Lampugnani, Monika S Doblin, Antony Bacic, Sumie Ishiguro

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 123 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. EPAD1 Orthologs Play a Conserved Role in Pollen Exine Patterning.International journal of molecular sciences · 2024
    Article
  8. Article
  9. Knockout of eightCell surface (Amsterdam, Netherlands) · 2023
    Article
  10. Review
  11. Article
  12. Cold Stress Response Mechanisms in Anther Development.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Hydroxyproline-Frontiers in plant science · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Toshiya SuzukiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Joan Oñate NarcisoGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Wei ZengGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Allison van de MeeneGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Masayuki YasutomiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Shunsuke TakemuraGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.
Edwin R LampugnaniGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.ORCID 0000-0002-3666-7240
Monika S DoblinGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.ORCID 0000-0002-8921-2725
Antony BacicGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and.ORCID 0000-0001-7483-8605
Sumie IshiguroGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan (T.S., M.Y., S.T., S.I.); and guronyan@agr.nagoya-u.ac.jp.ORCID 0000-0002-6160-7434
The University of Melbourne · AUAgriBio · AUNagoya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pollen exine is essential for protection from the environment of the male gametes of seed-producing plants, but its assembly and composition remain poorly understood. We previously characterized Arabidopsis (Arabidopsis thaliana) mutants with abnormal pollen exine structure and morphology that we named kaonashi (kns). Here we describe the identification of the causal gene of kns4 that was found to be a member of the CAZy glycosyltransferase 31 gene family, identical to UNEVEN PATTERN OF EXINE1, and the biochemical characterization of the encoded protein. The characteristic exine phenotype in the kns4 mutant is related to an abnormality of the primexine matrix laid on the surface of developing microspores. Using light microscopy with a combination of type II arabinogalactan (AG) antibodies and staining with the arabinogalactan-protein (AGP)-specific β-Glc Yariv reagent, we show that the levels of AGPs in the kns4 microspore primexine are considerably diminished, and their location differs from that of wild type, as does the distribution of pectin labeling. Furthermore, kns4 mutants exhibit reduced fertility as indicated by shorter fruit lengths and lower seed set compared to the wild type, confirming that KNS4 is critical for pollen viability and development. KNS4 was heterologously expressed in Nicotiana benthamiana, and was shown to possess β-(1,3)-galactosyltransferase activity responsible for the synthesis of AG glycans that are present on both AGPs and/or the pectic polysaccharide rhamnogalacturonan I. These data demonstrate that defects in AGP/pectic glycans, caused by disruption of KNS4 function, impact pollen development and viability in Arabidopsis.

Indexed as

ArabidopsisArabidopsis ProteinsBiopolymersCarotenoidsEpitopesFertilityGalactansGalactosyltransferasesGene Expression Regulation, PlantGenes, PlantModels, BiologicalMutationPectinsPhenotypePollenArabidopsis ProteinsarabinogalactanBiopolymersCarotenoidsEpitopesGalactansGalactosyltransferasesPectinssporopollenin

Identifiers

PMID27837085
PMCPMC5210738
OpenAlexW2554552721

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.