Evidence map›Paper›PMID 27834722›Full record

ArticleGenome announcements2016

Complete Genome Sequence of Aggregatibacter actinomycetemcomitans Strain IDH781.

Anthony C May, Rachel L Ehrlich, Sergey Balashov, Garth D Ehrlich, Mayilvahanan Shanmugam, Daniel H Fine, Narayanan Ramasubbu, Joshua Chang Mell, Carla Cugini

Abstract read
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Molecular Analysis ofPathogens (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Whole genome sequencing ofBiotechnology reports (Amsterdam, Netherlands) · 2021
    Article
  5. Journal of oral microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anthony C MayDepartment of Oral Biology, Rutgers School of Dental Medicine, Newark, New Jersey, USA.
Rachel L EhrlichDepartment of Microbiology and Immunology, Center for Genomic Sciences (CGS), Institute for Molecular Medicine & Infectious Disease, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Sergey BalashovDepartment of Microbiology and Immunology, Center for Genomic Sciences (CGS), Institute for Molecular Medicine & Infectious Disease, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Garth D EhrlichDepartment of Microbiology and Immunology, Center for Genomic Sciences (CGS), Institute for Molecular Medicine & Infectious Disease, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Mayilvahanan ShanmugamDepartment of Oral Biology, Rutgers School of Dental Medicine, Newark, New Jersey, USA.
Daniel H FineDepartment of Oral Biology, Rutgers School of Dental Medicine, Newark, New Jersey, USA.
Narayanan RamasubbuDepartment of Oral Biology, Rutgers School of Dental Medicine, Newark, New Jersey, USA.
Joshua Chang MellDepartment of Microbiology and Immunology, Center for Genomic Sciences (CGS), Institute for Molecular Medicine & Infectious Disease, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.ORCID http://orcid.org/0000-0003-0222-5636
Carla CuginiDepartment of Oral Biology, Rutgers School of Dental Medicine, Newark, New Jersey, USA cc1337@sdm.rutgers.edu.ORCID http://orcid.org/0000-0001-5321-0608

Funding

MOLECULAR ANALYSIS OF PATHOGENS IN OTITIS MEDIA BY PCRR01DC002148 · NIDCD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI EHRLICH, GARTH D. · 1994 to 2017
$6.5M
NIDCD NIH HHS R01 DC002148
6 · The paper itself

Abstract

We report here the complete genomic sequence and methylome of Aggregatibacter actinomycetemcomitans strain IDH781. This rough strain is used extensively as a model organism to characterize localized aggressive periodontitis pathogenesis, the basic biology and oral cavity colonization of A. actinomycetemcomitans, and its interactions with other members of the oral microbiome.

Identifiers

PMID27834722
PMCPMC5105115

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.