Evidence map›Paper›PMID 27827441›Full record

ArticleScientific reports2016

Functional roles of Arabidopsis CKRC2/YUCCA8 gene and the involvement of PIF4 in the regulation of auxin biosynthesis by cytokinin.

Dong-Wei Di, Lei Wu, Li Zhang, Chen-Wei An, Tian-Zi Zhang, Pan Luo, Huan-Huan Gao, Verena Kriechbaumer, Guang-Qin Guo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

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  15. The Photoperiod Stress Response inInternational journal of molecular sciences · 2022
    Article
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  19. Article
  20. Cytokinin-Controlled Gradient Distribution of Auxin inInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Dong-Wei DiInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Lei WuInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Li ZhangInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Chen-Wei AnInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Tian-Zi ZhangInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Pan LuoInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Huan-Huan GaoInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Verena KriechbaumerPlant Cell Biology, Biological and Medical Sciences, Oxford Brookes University, Oxford OX3 0BP, United Kingdom.
Guang-Qin GuoInstitute of Cell Biology and MOE Key Laboratory of Cell Activities and Stress Adaptations, Lanzhou University, Lanzhou 730000, China.
Lanzhou University · CNOxford Brookes University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin and cytokinin (CK) are both important hormones involved in many aspects of plant growth and development. However, the details of auxin biosynthesis and the interaction between auxin and CK are still unclear. Isolation and characterization of an auxin deficient mutant cytokinin induced root curling 2 (ckrc2) in this work reveal that CKRC2 encodes a previously identified member of YUCCA (YUC) flavin monooxygenase-like proteins (YUC8). Our results show that, like other YUCs, CKRC2/YUC8 is a rate-limiting enzyme for catalyzing the conversion of indole-3-pyruvic acid (IPyA) to indole-3-acetic acid (IAA), acting downstream of CKRC1/TAA1 in the IPyA pathway. Here we show that the transcription of both CKRC1/TAA and CKRC2/YUC8 can be induced by CK and that the phytochrome-interacting factor 4 (PIF4) is required for this upregulation. Transcription of PIF4 itself is induced by CK via the AHKs-ARR1/12 signalling pathway. These results indicate that PIF4 plays an essential role in mediating the regulatory effect of CK on the transcriptions of CKRC1 and CKRC2 genes in the IPyA pathway of auxin biosynthesis.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCytokininsGene Expression Regulation, PlantIndoleacetic AcidsMixed Function OxygenasesPlant RootsSignal TransductionArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCytokininsIndoleacetic AcidsMixed Function OxygenasesPIF4 protein, ArabidopsisYUCCA8 protein, Arabidopsis

Identifiers

PMID27827441
PMCPMC5101810
OpenAlexW2549240509

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.