Evidence map›Paper›PMID 27827410›Full record

ArticleScientific reports2016

SGTA interacts with the proteasomal ubiquitin receptor Rpn13 via a carboxylate clamp mechanism.

Arjun Thapaliya, Yvonne Nyathi, Santiago Martínez-Lumbreras, Ewelina M Krysztofinska, Nicola J Evans, Isabelle L Terry, Stephen High, Rivka L Isaacson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. The roles of cytosolic quality control proteins, SGTA and the BAG6 complex, in disease.Advances in protein chemistry and structural biology · 2019
    Review
  9. FEBS open bio · 2018
    Article
  10. Article
  11. Mechanisms of Tail-Anchored Membrane Protein Targeting and Insertion.Annual review of cell and developmental biology · 2017
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Arjun ThapaliyaDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
Yvonne NyathiSchool of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, The Michael Smith Building, Oxford Road, Manchester, M13 9PT, U.K.
Santiago Martínez-LumbrerasDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
Ewelina M KrysztofinskaDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
Nicola J EvansDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
Isabelle L TerryDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
Stephen HighSchool of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, The Michael Smith Building, Oxford Road, Manchester, M13 9PT, U.K.
Rivka L IsaacsonDepartment of Chemistry, King's College London, Britannia House, Trinity Street, London, SE1 1DB, U.K.
King's College London · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J014567/1Biotechnology and Biological Sciences Research Council BB/L006510/1Biotechnology and Biological Sciences Research Council BB/L006952/1Biotechnology and Biological Sciences Research Council BB/N006267/1Medical Research Council G0900936Wellcome Trust
6 · The paper itself

Abstract

The fate of secretory and membrane proteins that mislocalize to the cytosol is decided by a collaboration between cochaperone SGTA (small, glutamine-rich, tetratricopeptide repeat protein alpha) and the BAG6 complex, whose operation relies on multiple transient and subtly discriminated interactions with diverse binding partners. These include chaperones, membrane-targeting proteins and ubiquitination enzymes. Recently a direct interaction was discovered between SGTA and the proteasome, mediated by the intrinsic proteasomal ubiquitin receptor Rpn13. Here, we structurally and biophysically characterize this binding and identify a region of the Rpn13 C-terminal domain that is necessary and sufficient to facilitate it. We show that the contact occurs through a carboxylate clamp-mediated molecular recognition event with the TPR domain of SGTA, and provide evidence that the interaction can mediate the association of Rpn13 and SGTA in a cellular context.

Indexed as

Carrier ProteinsHumansIntracellular Signaling Peptides and ProteinsMembrane GlycoproteinsMolecular ChaperonesProtein BindingProtein DomainsADRM1 protein, humanCarrier ProteinsIntracellular Signaling Peptides and ProteinsMembrane GlycoproteinsMolecular ChaperonesSGTA protein, human

Identifiers

PMID27827410
PMCPMC5101480
OpenAlexW2549125891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.