Evidence map›Paper›PMID 27826313›Full record

ArticleFrontiers in plant science2016

Search for Nodulation and Nodule Development-Related Cystatin Genes in the Genome of Soybean (

Songli Yuan, Rong Li, Lei Wang, Haifeng Chen, Chanjuan Zhang, Limiao Chen, Qingnan Hao, Zhihui Shan, Xiaojuan Zhang, Shuilian Chen and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2021
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Songli YuanKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Rong LiKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Lei WangBioinformatics Laboratory, College of Life Sciences, Xinyang Normal University Xinyang, China.
Haifeng ChenKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Chanjuan ZhangKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Limiao ChenKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Qingnan HaoKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Zhihui ShanKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Xiaojuan ZhangKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Shuilian ChenKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Zhonglu YangKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Dezhen QiuKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Xinan ZhouKey Laboratory of Oil Crop Biology, Ministry of AgricultureWuhan, China; Oil Crops Research Institute of Chinese Academy of Agriculture SciencesWuhan, China.
Oil Crops Research Institute · CNXinyang Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nodulation, nodule development and senescence directly affects nitrogen fixation efficiency, and previous studies have shown that inhibition of some cysteine proteases delay nodule senescence, so their nature inhibitors, cystatin genes, are very important in nodulation, nodule development, and senescence. Although several cystatins are actively transcribed in soybean nodules, their exact roles and functional diversities in legume have not been well explored in genome-wide survey studies. In this report, we performed a genome-wide survey of cystatin family genes to explore their relationship to nodulation and nodule development in soybean and identified 20 cystatin genes that encode peptides with 97-245 amino acid residues, different isoelectric points (pI) and structure characteristics, and various putative plant regulatory elements in 3000 bp putative promoter fragments upstream of the 20 soybean cystatins in response to different abiotic/biotic stresses, hormone signals, and symbiosis signals. The expression profiles of these cystatin genes in soybean symbiosis with rhizobium strain

Indexed as

cystatingene expressiongenome-wide surveyroot nodule symbiosissoybean

Identifiers

PMID27826313
PMCPMC5078837
OpenAlexW2537175269

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.