Evidence map›Paper›PMID 27825771›Full record

ReviewTrends in biochemical sciences2017

Riches in RAGs: Revealing the V(D)J Recombinase through High-Resolution Structures.

Karla K Rodgers

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Karla K RodgersDepartment of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73190, USA. Electronic address: karla-rodgers@ouhsc.edu.

Funding

Regulation of the VDJ recombinase during genotoxic stressR21AI094141 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI RODGERS, KARLA K · 2012 to 2013
$374k
Single cell visualization of the V(D)J recombinase complexR03AI126001 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI RODGERS, KARLA K · 2016 to 2017
$148k
NIAID NIH HHS R03 AI126001NIAID NIH HHS R21 AI094141
6 · The paper itself

Abstract

Development of the adaptive immune system is dependent on V(D)J recombination, which forms functional antigen receptor genes through rearrangement of component gene segments. The V(D)J recombinase, comprising recombination-activating proteins RAG1 and RAG2, guides the initial DNA cleavage events to the recombination signal sequence (RSS), which flanks each gene segment. Although the enzymatic steps for RAG-mediated endonucleolytic activity were established over two decades ago, only recently have high-resolution structural studies of the catalytically active core regions of the RAG proteins shed light on conformational requirements for the reaction. While outstanding questions remain, we have a clearer picture of how RAG proteins function in generating the diverse repertoires of antigen receptors, the underlying foundation of the adaptive immune system.

Indexed as

AnimalsDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA CleavageHomeodomain ProteinsProtein ConformationVDJ RecombinasesDNA-Binding ProteinsHomeodomain ProteinsRAG-1 proteinVDJ RecombinasesV(D)J recombination activating protein 2lymphocyte developmentRAG1RAG2V(D)J recombination

Identifiers

PMID27825771
PMCPMC5182142

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.