Evidence map›Paper›PMID 27825346›Full record

ArticleBiomedical engineering online2016

A vessel segmentation method for multi-modality angiographic images based on multi-scale filtering and statistical models.

Pei Lu, Jun Xia, Zhicheng Li, Jing Xiong, Jian Yang, Shoujun Zhou, Lei Wang, Mingyang Chen, Cheng Wang

Open access · goldAbstract read
In one paragraph

Article in Biomedical engineering online, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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  5. Semi-automated cerebral aneurysm segmentation and geometric analysis for WEB sizing utilizing a cloud-based computational platform.Interventional neuroradiology : journal of peritherapeutic neuroradiology, surgical procedures and related neurosciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Pei LuResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Jun XiaRadiology Department, Shenzhen Second People's Hospital, The First Affiliated Hospital of Shenzhen University, Shenzhen, 518035, China.
Zhicheng LiResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Jing XiongResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Jian YangBeijing Engineering Research Centre of Mixed Reality and Advanced Display, School of Optics and Electronics, Beijing Institute of Technology, Beijing, 100081, China.
Shoujun ZhouResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China. sj.zhou@siat.ac.cn.
Lei WangResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Mingyang ChenResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Cheng WangResearch Centre for Medical Robotics and Minimally Invasive Surgical Devices, Institute of Biomedical and Health Engineering, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Shenzhen Institutes of Advanced Technology · CNChinese Academy of Sciences · CNBeijing Institute of Technology · CNShenzhen Second People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAccurate segmentation of blood vessels plays an important role in the computer-aided diagnosis and interventional treatment of vascular diseases. The statistical method is an important component of effective vessel segmentation; however, several limitations discourage the segmentation effect, i.e., dependence of the image modality, uneven contrast media, bias field, and overlapping intensity distribution of the object and background. In addition, the mixture models of the statistical methods are constructed relaying on the characteristics of the image histograms. Thus, it is a challenging issue for the traditional methods to be available in vessel segmentation from multi-modality angiographic images.

methodsTo overcome these limitations, a flexible segmentation method with a fixed mixture model has been proposed for various angiography modalities. Our method mainly consists of three parts. Firstly, multi-scale filtering algorithm was used on the original images to enhance vessels and suppress noises. As a result, the filtered data achieved a new statistical characteristic. Secondly, a mixture model formed by three probabilistic distributions (two Exponential distributions and one Gaussian distribution) was built to fit the histogram curve of the filtered data, where the expectation maximization (EM) algorithm was used for parameters estimation. Finally, three-dimensional (3D) Markov random field (MRF) were employed to improve the accuracy of pixel-wise classification and posterior probability estimation. To quantitatively evaluate the performance of the proposed method, two phantoms simulating blood vessels with different tubular structures and noises have been devised. Meanwhile, four clinical angiographic data sets from different human organs have been used to qualitatively validate the method. To further test the performance, comparison tests between the proposed method and the traditional ones have been conducted on two different brain magnetic resonance angiography (MRA) data sets.

resultsThe results of the phantoms were satisfying, e.g., the noise was greatly suppressed, the percentages of the misclassified voxels, i.e., the segmentation error ratios, were no more than 0.3%, and the Dice similarity coefficients (DSCs) were above 94%. According to the opinions of clinical vascular specialists, the vessels in various data sets were extracted with high accuracy since complete vessel trees were extracted while lesser non-vessels and background were falsely classified as vessel. In the comparison experiments, the proposed method showed its superiority in accuracy and robustness for extracting vascular structures from multi-modality angiographic images with complicated background noises.

conclusionsThe experimental results demonstrated that our proposed method was available for various angiographic data. The main reason was that the constructed mixture probability model could unitarily classify vessel object from the multi-scale filtered data of various angiography images. The advantages of the proposed method lie in the following aspects: firstly, it can extract the vessels with poor angiography quality, since the multi-scale filtering algorithm can improve the vessel intensity in the circumstance such as uneven contrast media and bias field; secondly, it performed well for extracting the vessels in multi-modality angiographic images despite various signal-noises; and thirdly, it was implemented with better accuracy, and robustness than the traditional methods. Generally, these traits declare that the proposed method would have significant clinical application.

Indexed as

Models, StatisticalAlgorithmsBlood VesselsBrainHumansImage Processing, Computer-AssistedMagnetic Resonance AngiographySignal-To-Noise RatioMarkov random fieldMulti-modality angiographic imagesMulti-scale filteringStatistical mixture modelVessel segmentation

Identifiers

PMID27825346
PMCPMC5101797
OpenAlexW2550957658

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.