Evidence map›Paper›PMID 27825304›Full record

ArticleBMC microbiology2016

OxyR-regulated catalase CatB promotes the virulence in rice via detoxifying hydrogen peroxide in Xanthomonas oryzae pv. oryzae.

Chao Yu, Nu Wang, Maosen Wu, Fang Tian, Huamin Chen, Fenghuan Yang, Xiaochen Yuan, Ching-Hong Yang, Chenyang He

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. The APSES transcription factor Swi6B upregulatesApplied and environmental microbiology · 2025
    Article
  3. Article
  4. Article
  5. ClpA affects the virulence ofFrontiers in microbiology · 2024
    Article
  6. Article
  7. Review
  8. OxyR contributes to virulence ofFrontiers in microbiology · 2022
    Article
  9. Article
  10. Article
  11. Redox Protein OsaR (PA0056) RegulatesAntimicrobial agents and chemotherapy · 2021
    Article
  12. Article
  13. Pathogens (Basel, Switzerland) · 2020
    Article
  14. Article
  15. Review
  16. Structural snapshots of OxyR reveal the peroxidatic mechanism of HProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Chao YuState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Nu WangState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Maosen WuState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Fang TianState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Huamin ChenState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Fenghuan YangState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Xiaochen YuanDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Ching-Hong YangDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Chenyang HeState Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. hechenyang@caas.cn.
Chinese Academy of Agricultural Sciences · CNInstitute of Plant Protection · CNUniversity of Wisconsin–Milwaukee · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTo facilitate infection, Xanthomonas oryzae pv. oryzae (Xoo), the bacterial blight pathogen of rice, needs to degrade hydrogen peroxide (H

resultsThe catB gene encodes a putative catalase and is highly conserved in the sequenced strains of Xanthomonas spp. β-galactosidase analysis and electrophoretic mobility shift assays (EMSA) showed that OxyR positively regulated the transcription of catB by directly binding to its promoter region. The quantitative real-time PCR (qRT-PCR) assays revealed that the expression levels of catB and oxyR were significantly induced by H

conclusionsTranscription of catB is enhanced by OxyR in response to exogenous H

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsCatalaseHydrogen PeroxideOryzaPlant DiseasesVirulenceXanthomonasBacterial ProteinsCatalaseHydrogen PeroxideCatalaseHydrogen peroxideVirulenceXanthomonas oryzae pv. oryzae

Identifiers

PMID27825304
PMCPMC5101826
OpenAlexW2552578329

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.