Evidence map›Paper›PMID 27825295›Full record

ArticleBMC genomics2016

Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations.

Chunhui Li, Baocheng Sun, Yongxiang Li, Cheng Liu, Xun Wu, Dengfeng Zhang, Yunsu Shi, Yanchun Song, Edward S Buckler, Zhiwu Zhang and 2 more

Abstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

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28citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  8. Biotechnological Advances to Improve Abiotic Stress Tolerance in Crops.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Chunhui LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Baocheng SunInstitute of Food Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, 830000, China.
Yongxiang LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Cheng LiuInstitute of Food Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, 830000, China.
Xun WuInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Dengfeng ZhangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yunsu ShiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yanchun SongInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Edward S BucklerInstitute for Genomic Diversity, Cornell University, Ithaca, NY, USA. esb33@cornell.edu.
Zhiwu ZhangDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, USA. Zhiwu.Zhang@WSU.edu.
Tianyu WangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. wangtianyu@caas.cn.
Yu LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. liyu03@caas.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMaize requires more water than most other crops; therefore, the water use efficiency of this crop must be improved for maize production under undesirable land and changing environmental conditions.

resultsTo elucidate the genetic control of drought in maize, we evaluated approximately 5000 inbred lines from 30 linkage-association joint mapping populations under two contrasting water regimes for seven drought-related traits, including yield and anthesis-silking interval (ASI). The joint linkage analysis was conducted to identify 220 quantitative trait loci (QTLs) under well-watered conditions and 169 QTLs under water-stressed conditions. The genome-wide association analysis identified 365 single nucleotide polymorphisms (SNPs) associated with drought-related traits, and these SNPs were located in 354 candidate genes. Fifty-two of these genes showed significant differential expression in the inbred line B73 under the well-watered and water-stressed conditions. In addition, genomic predictions suggested that the moderate-density SNPs obtained through genotyping-by-sequencing were able to make accurate predictions in the nested association mapping population for drought-related traits with moderate-to-high heritability under the water-stressed conditions.

conclusionsThe results of the present study provide important information that can be used to understand the genetic basis of drought stress responses and facilitate the use of beneficial alleles for the improvement of drought tolerance in maize.

Indexed as

Chromosome MappingDroughtsGenetic Association StudiesQuantitative Trait LociAdaptation, BiologicalDehydrationGenetics, PopulationPhenotypePolymorphism, Single NucleotideQuantitative Trait, HeritableStress, PhysiologicalZea maysCandidate geneDrought toleranceGWASJoint linkage mappingMaizeNested association mapping population

Identifiers

PMID27825295
PMCPMC5101730

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.