Evidence map›Paper›PMID 27824329›Full record

ArticleNature communications2016

De novo genic mutations among a Chinese autism spectrum disorder cohort.

Tianyun Wang, Hui Guo, Bo Xiong, Holly A F Stessman, Huidan Wu, Bradley P Coe, Tychele N Turner, Yanling Liu, Wenjing Zhao, Kendra Hoekzema and 19 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 227 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
227citing papers in PubMed, 4 pooled it
16.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

227 citing papers in PubMed, 4 syntheses or guidelines pooled it, 386 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. MYT1L: A systematic review of genetic variation encompassing schizophrenia and autism.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2020
    Pooled it
  4. Pooled it
  5. Genes · 2026
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  16. Translational pediatrics · 2026
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167 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 7 institutions in 2 countries.

Tianyun WangThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Hui GuoThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Bo XiongDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Holly A F StessmanDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Huidan WuThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Bradley P CoeDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Tychele N TurnerDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.ORCID 0000-0001-8246-6477
Yanling LiuThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Wenjing ZhaoThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Kendra HoekzemaDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Laura VivesDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Lu XiaThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Meina TangThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Jianjun OuMental Health Institute, the Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Biyuan ChenChildren's Development Behavior Center, Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, Guangdong 510630, China.
Yidong ShenMental Health Institute, the Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Guanglei XunMental Health Center of Shandong Province, Jinan, Shandong 250014, China.
Min LongThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Janice LinDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Zev N KronenbergDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Yu PengThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Ting BaiThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Honghui LiChild Healthcare Department, Liuzhou Maternity and Child Healthcare Hospital, Liuzhou, Guangxi 545000, China.
Xiaoyan KeChild Mental Health Research Center, Nanjing Brain Hospital Affiliated of Nanjing Medical University, Nanjing, Jiangsu 210029, China.
Zhengmao HuThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Jingping ZhaoMental Health Institute, the Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Xiaobing ZouChildren's Development Behavior Center, Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, Guangdong 510630, China.
Kun XiaThe State Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan 410078, China.
Evan E EichlerDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA.
Central South University · CNUniversity of Washington · USSun Yat-sen University · CNHoward Hughes Medical Institute · USLiuzhou Maternal and Child Health Hospital · CNNanjing Brain Hospital · CNShandong Mental Health Center · CN

Funding

INTERDISCIPLINARY TRAINING IN GENOMIC SCIENCEST32HG000035 · NHGRI · UNIVERSITY OF WASHINGTON · PI Bruce Colston Trapnell · 1995 to 2026
$24.2M
Sporadic Mutations and Autism Spectrum DisordersR01MH101221 · NIMH · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 2013 to 2025
$9.2M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2014 to 2019
$7.9M
NHGRI NIH HHS T32 HG000035NICHD NIH HHS U54 HD083091NIMH NIH HHS R01 MH101221
6 · The paper itself

Abstract

Recurrent de novo (DN) and likely gene-disruptive (LGD) mutations contribute significantly to autism spectrum disorders (ASDs) but have been primarily investigated in European cohorts. Here, we sequence 189 risk genes in 1,543 Chinese ASD probands (1,045 from trios). We report an 11-fold increase in the odds of DN LGD mutations compared with expectation under an exome-wide neutral model of mutation. In aggregate, ∼4% of ASD patients carry a DN mutation in one of just 29 autism risk genes. The most prevalent gene for recurrent DN mutations is SCN2A (1.1% of patients) followed by CHD8, DSCAM, MECP2, POGZ, WDFY3 and ASH1L. We identify novel DN LGD recurrences (GIGYF2, MYT1L, CUL3, DOCK8 and ZNF292) and DN mutations in previous ASD candidates (ARHGAP32, NCOR1, PHIP, STXBP1, CDKL5 and SHANK1). Phenotypic follow-up confirms potential subtypes and highlights how large global cohorts might be leveraged to prove the pathogenic significance of individually rare mutations.

Indexed as

Asian PeopleAutism Spectrum DisorderCohort StudiesDNA Mutational AnalysisExomeGenetic Predisposition to DiseaseGeographyHumansInheritance PatternsMutationPhenotypePolymorphism, Single NucleotideRisk Factors

Identifiers

PMID27824329
PMCPMC5105161
OpenAlexW2553463105

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.