Evidence map›Paper›PMID 27824160›Full record

ArticleScientific reports2016

Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta.

Xiaofei Lv, Bin Ma, Junbao Yu, Scott X Chang, Jianming Xu, Yunzhao Li, Guangmei Wang, Guangxuan Han, Guan Bo, Xiaojing Chu

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  8. Organic matter decay and bacterial community succession in mangroves under simulated climate change scenarios.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
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  9. Article
  10. Review
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  12. Effects of Variation inInternational journal of environmental research and public health · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaofei LvInstitute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou, 310058, China.
Bin MaInstitute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou, 310058, China.
Junbao YuCollege of Resource and Environmental Engineering, Ludong University, Yantai, 264025, China.
Scott X ChangDepartment of Renewable Resources, University of Alberta, Edmonton, Alberta, T6G2E3, Canada.
Jianming XuInstitute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou, 310058, China.
Yunzhao LiCollege of Resource and Environmental Engineering, Ludong University, Yantai, 264025, China.
Guangmei WangKey Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Research, Chinese Academy of Sciences (CAS), Yantai, 264003, China.
Guangxuan HanKey Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Research, Chinese Academy of Sciences (CAS), Yantai, 264003, China.
Guan BoKey Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Research, Chinese Academy of Sciences (CAS), Yantai, 264003, China.
Xiaojing ChuKey Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Research, Chinese Academy of Sciences (CAS), Yantai, 264003, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coastal ecosystems play significant ecological and economic roles but are threatened and facing decline. Microbes drive various biogeochemical processes in coastal ecosystems. Tidal flats are critical components of coastal ecosystems; however, the structure and function of microbial communities in tidal flats are poorly understood. Here we investigated the seasonal variations of bacterial communities along a tidal flat series (subtidal, intertidal and supratidal flats) and the factors affecting the variations. Bacterial community composition and diversity were analyzed over four seasons by 16S rRNA genes using the Ion Torrent PGM platform. Bacterial community composition differed significantly along the tidal flat series. Bacterial phylogenetic diversity increased while phylogenetic turnover decreased from subtidal to supratidal flats. Moreover, the bacterial community structure differed seasonally. Canonical correspondence analysis identified salinity as a major environmental factor structuring the microbial community in the sediment along the successional series. Meanwhile, temperature and nitrite concentration were major drivers of seasonal microbial changes. Despite major compositional shifts, nitrogen, methane and energy metabolisms predicted by PICRUSt were inhibited in the winter. Taken together, this study indicates that bacterial community structure changed along the successional tidal flat series and provides new insights on the characteristics of bacterial communities in coastal ecosystems.

Indexed as

BiodiversityTidal WavesWater MicrobiologyBacteriaChinaMicrobial ConsortiaRiversRNA, BacterialRNA, Ribosomal, 16SRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID27824160
PMCPMC5099912

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.