Evidence map›Paper›PMID 27824067›Full record

ArticleScientific reports2016

Biological function of a polysaccharide degrading enzyme in the periplasm.

Yajie Wang, M Fata Moradali, Ali Goudarztalejerdi, Ian M Sims, Bernd H A Rehm

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Alginate Biosynthesis ofFood science & nutrition · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Yajie WangInstitute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
M Fata MoradaliInstitute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Ali GoudarztalejerdiDepartment of Pathobiology, School of Paraveterinary Science, Bu-Ali Sina University, Hamadan, Iran.
Ian M SimsThe Ferrier Research Institute, Victoria University of Wellington, Lower Hutt, Wellington, New Zealand.
Bernd H A RehmInstitute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Massey University · NZBu-Ali Sina University · IRVictoria University of Wellington · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbohydrate polymers are industrially and medically important. For instance, a polysaccharide, alginate (from seaweed), is widely used in food, textile and pharmaceutical industries. Certain bacteria also produce alginate through membrane spanning multi-protein complexes. Using Pseudomonas aeruginosa as a model organism, we investigated the biological function of an alginate degrading enzyme, AlgL, in alginate production and biofilm formation. We showed that AlgL negatively impacts alginate production through its enzymatic activity. We also demonstrated that deletion of AlgL does not interfere with polymer length control, epimerization degree or stability of the biosynthesis complex, arguing that AlgL is a free periplasmic protein dispensable for alginate production. This was further supported by our protein-stability and interaction experiments. Interestingly, over-production of AlgL interfered with polymer length control, suggesting that AlgL could be loosely associated with the biosynthesis complex. In addition, chromosomal expression of algL enhanced alginate O-acetylation; both attachment and dispersal stages of the bacterial biofilm lifecycle were sensitive to the level of O-acetylation. Since this modification also protects the pathogen against host defences and enhances other virulence factors, chromosomal expression of algL could be important for the pathogenicity of this organism. Overall, this work improves our understanding of bacterial alginate production and provides new knowledge for alginate production and disease control.

Indexed as

AcetylationAlginatesBacterial ProteinsBiofilmsGene DeletionGlucuronic AcidHexuronic AcidsPeriplasmPolysaccharide-LyasesProtein StabilityPseudomonas aeruginosaAlginatesBacterial ProteinsGlucuronic AcidHexuronic AcidsPolysaccharide-Lyases

Identifiers

PMID27824067
PMCPMC5099689
OpenAlexW2555912930

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.