Evidence map›Paper›PMID 27822542›Full record

ArticlemSystems

RNA Sequencing-Based Genome Reannotation of the Dermatophyte

Van Du T Tran, Niccolò De Coi, Marc Feuermann, Emanuel Schmid-Siegert, Elena-Tatiana Băguţ, Bernard Mignon, Patrice Waridel, Corinne Peter, Sylvain Pradervand, Marco Pagni and 1 more

Open access · goldAbstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  3. SUB6 Subtilisin is Involved During the Initial Adhesion ofJID innovations : skin science from molecules to population health · 2025
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  7. Relevance of Nutrient-Sensing in the Pathogenesis ofFrontiers in fungal biology · 2022
    Article
  8. Comprehensive Assessment of the Virulence FactorsJournal of fungi (Basel, Switzerland) · 2021
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Van Du T TranVital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.ORCID 0000-0003-2074-5029
Niccolò De CoiDepartment of Dermatology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
Marc FeuermannSwiss-Prot Group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland.
Emanuel Schmid-SiegertVital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
Elena-Tatiana BăguţFundamental and Applied Research for Animals & Health (FARAH), Department of Infectious and Parasitic Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Bernard MignonFundamental and Applied Research for Animals & Health (FARAH), Department of Infectious and Parasitic Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Patrice WaridelProtein Analysis Facility, Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Corinne PeterGenomic Technologies Facility, Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Sylvain PradervandGenomic Technologies Facility, Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Marco PagniVital-IT group, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
Michel MonodDepartment of Dermatology, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland.
SIB Swiss Institute of Bioinformatics · CHUniversity of Lausanne · CHUniversity Hospital of Lausanne · CHUniversity of Liège · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dermatophytes are the most common agents of superficial mycoses in humans and animals. The aim of the present investigation was to systematically identify the extracellular, possibly secreted, proteins that are putative virulence factors and antigenic molecules of dermatophytes. A complete gene expression profile of

Indexed as

annotationArthroderma benhamiaedermatophytesinfectionproteasesRNA-seqsecreted proteinsTrichophyton

Identifiers

PMID27822542
PMCPMC5069957
OpenAlexW2501204655

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.