Evidence map›Paper›PMID 27822317›Full record

ArticleClinical epigenetics2016

Narrowing the

Przemyslaw Szafranski, Carmen Herrera, Lori A Proe, Brittany Coffman, Debra L Kearney, Edwina Popek, Paweł Stankiewicz

Open access · goldAbstract readCase Reports
In one paragraph

Article in Clinical epigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Long Non-Coding RNAGenes · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Clinical, Histopathological, and Molecular Diagnostics in Lethal Lung Developmental Disorders.American journal of respiratory and critical care medicine · 2019
    Review
  16. Review
  17. CRISPR/Cas9-mediated deletion of lncRNA Gm26878 in the distant Foxf1 enhancer region.Mammalian genome : official journal of the International Mammalian Genome Society · 2017
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Przemyslaw SzafranskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, ABBR R809, Houston, TX 77030 USA.
Carmen HerreraDepartment of Pediatrics, University of New Mexico, Albuquerque, NM USA.
Lori A ProeDepartment of Pathology, University of New Mexico, Albuquerque, NM USA.
Brittany CoffmanDepartment of Pathology, University of New Mexico, Albuquerque, NM USA.
Debra L KearneyDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, TX USA.
Edwina PopekDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, TX USA.
Paweł StankiewiczDepartment of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, ABBR R809, Houston, TX 77030 USA.ORCID 0000-0002-6456-7490
Baylor College of Medicine · USUniversity of New Mexico · US

Funding

Pathogenetics of the FOX transcription factor gene cluster on 16q24.1R01HL101975 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI STANKIEWICZ, PAWEL · 2010 to 2013
$1.8M
NHLBI NIH HHS R01 HL101975
6 · The paper itself

Abstract

backgroundAlveolar capillary dysplasia with misalignment of pulmonary veins (ACDMPV) is a rare lethal lung developmental disorder caused by heterozygous point mutations or genomic deletions involving

findingsUsing custom-designed aCGH and Sanger sequencing, we have identified a novel de novo 104 kb genomic deletion upstream of

conclusionsSubstantial narrowing and bisulfite sequencing of the

Indexed as

Enhancer Elements, GeneticSequence DeletionBinding SitesChromosomes, Human, Pair 16Comparative Genomic HybridizationCpG IslandsEstrogen Receptor alphaFemaleForkhead Transcription FactorsGATA3 Transcription FactorGenomic ImprintingHumansInfant, NewbornMalePersistent Fetal Circulation SyndromeRNA, Long NoncodingESR1 protein, humanEstrogen Receptor alphaForkhead Transcription FactorsFOXF1 protein, humanGATA3 protein, humanGATA3 Transcription FactorRNA, Long NoncodingYY1 protein, humanYY1 Transcription FactorCopy-number variantsGenomic imprintingTranscriptional enhancer

Identifiers

PMID27822317
PMCPMC5093964
OpenAlexW2548691386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.