Evidence map›Paper›PMID 27821762›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

X-ray and cryo-EM structures of monomeric and filamentous actin-like protein MamK reveal changes associated with polymerization.

Jan Löwe, Shaoda He, Sjors H W Scheres, Christos G Savva

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

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0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A family of bacterial actin homologs forms a three-stranded tubular structure.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Cryo-EM reconstruction of AlfA fromProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Near-atomic structure of jasplakinolide-stabilized malaria parasite F-actin reveals the structural basis of filament instability.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Review
  16. Helical reconstruction in RELION.Journal of structural biology · 2017
    Article
  17. Article
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Jan LöweMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom jyl@mrc-lmb.cam.ac.uk.ORCID 0000-0002-5218-6615
Shaoda HeMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.
Sjors H W ScheresMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.ORCID 0000-0002-0462-6540
Christos G SavvaMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.

Funding

Medical Research Council MC_U105184322Medical Research Council MC_U105184326Medical Research Council MC_UP_A025_1013Medical Research Council U105184326Wellcome TrustWellcome Trust 095514/Z/11/Z
6 · The paper itself

Abstract

Magnetotactic bacteria produce iron-rich magnetic nanoparticles that are enclosed by membrane invaginations to form magnetosomes so they are able to sense and act upon Earth's magnetic field. In Magnetospirillum and other magnetotactic bacteria, to combine their magnetic moments, magnetosomes align along filaments formed by a bacterial actin homolog, MamK. Here, we present the crystal structure of a nonpolymerizing mutant of MamK from Magnetospirillum magneticum AMB-1 at 1.8-Å resolution, revealing its close similarity to actin and MreB. The crystals contain AMPPNP-bound monomeric MamK in two different conformations. To investigate conformational changes associated with polymerization, we used unmodified MamK protein and cryo-EM with helical 3D reconstruction in RELION to obtain a density map and a fully refined atomic model of MamK in filamentous form at 3.6-Å resolution. The filament is parallel (polar) double-helical, with a rise of 52.2 Å and a twist of 23.8°. As shown previously and unusually for actin-like filaments, the MamK subunits from each of the two strands are juxtaposed, creating an additional twofold axis along the filament. Compared with monomeric MamK, ADP-bound MamK in the filament undergoes a conformational change, rotating domains I and II against each other to further close the interdomain cleft between subdomains IB and IIB. The domain movement causes several loops to close around the nucleotide-binding pocket. Glu-143, a key residue for catalysis coordinating the magnesium ion, moves closer, presumably switching nucleotide hydrolysis upon polymerization-one of the hallmarks of cytomotive filaments of the actin type.

Indexed as

Cryoelectron MicroscopyPolymerizationActin CytoskeletonActinsBacterial ProteinsCrystallography, X-RayMagnetospirillumModels, MolecularProtein SubunitsX-RaysActinsBacterial ProteinsProtein Subunitsbacterial cytoskeletoncryo-EMfilamentous proteinsmagnetosomesmagnetotactic bacteria

Identifiers

PMID27821762
PMCPMC5127371

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.